RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PANX1Q96RD7 426 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 ATG10Q9H0Y0 220 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 NOL6Q9H6R4 1146 aaKnown RBP6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 LRTM1Q9HBL6 345 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 AMBNQ9NP70 447 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 TMEM30AQ9NV96 361 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 GTF2IRD1Q9UHL9 959 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 MOSPD1Q9UJG1 213 aa6.79□□□□□ -1.32
SYNPO2-206ENST00000610556 hCG_2039718K7EN88 272 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PLOD2O00469 737 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 FBP2O00757 339 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PRKD3O94806 890 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PRAMEF1O95521 474 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 FADS2O95864 444 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ALPIP09923 528 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CD1DP15813 335 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 TYMPP19971 482 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PRDX3P30048 256 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 OXTRP30559 389 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SLC5A2P31639 672 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 STC1P52823 247 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PURAQ00577 322 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 UBE3AQ05086 875 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ACSM2AQ08AH3 577 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 TRIP4Q15650 581 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SPRYD7Q5W111 196 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ACSM2BQ68CK6 577 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 NANOGP8Q6NSW7 305 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PRSS55Q6UWB4 352 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 C11orf96Q7Z7L8 435 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 GPR180Q86V85 440 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 HID1Q8IV36 788 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 STX19Q8N4C7 294 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 TTC9BQ8N6N2 239 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 DRAXINQ8NBI3 349 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SOCS4Q8WXH5 440 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 TOP1MTQ969P6 601 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PYCR2Q96C36 320 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 REXO5Q96IC2 774 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CGREF1Q99674 301 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 GSTO2Q9H4Y5 243 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 NSUN3Q9H649 340 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 REEP1Q9H902 201 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 NANOGQ9H9S0 305 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CCM2LQ9NUG4 571 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 USE1Q9NZ43 259 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 RBMX2Q9Y388 322 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 MYADML2A6NDP7 307 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 C5orf58C9J3I9 102 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 B4GAT1O43505 415 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ACSL4O60488 711 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 DUSP11O75319 330 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 WDR47O94967 919 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 DIRAS1O95057 198 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SEC24AO95486 1093 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ALOX12P18054 663 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 OGNP20774 298 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PCSK6P29122 969 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 HTR7P34969 479 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ACADVLP49748 655 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 STARD3Q14849 445 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PTGR1Q14914 329 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SPDYE7PQ495Y7 208 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 LRRC73Q5JTD7 316 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 OTUD1Q5VV17 481 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PPP4R4Q6NUP7 873 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ADCK2Q7Z695 626 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ZNF467Q7Z7K2 595 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 DDX53Q86TM3 631 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 RETREG3Q86VR2 466 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SETD9Q8NE22 299 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 OR52B6Q8NGF0 335 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 SLC13A3Q8WWT9 602 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 AURKBQ96GD4 344 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 FEM1CQ96JP0 617 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 APOL4Q9BPW4 351 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 TNKS2Q9H2K2 1166 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 EPB41L1Q9H4G0 881 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 PDE10AQ9Y233 779 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 BRCA1P38398 1863 aaKnown RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ANKRD31Q8N7Z5 1873 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 UTRNP46939 3433 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 A0A0U1RQF3 1178 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 VILLO15195 856 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CBFA2T3O75081 653 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 EPN2O95208 641 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 ANGPTL1O95841 491 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 KRT8P05787 483 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 UMPSP11172 480 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CDK4P11802 303 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 COL6A1P12109 1028 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 JAK1P23458 1154 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 KCNC1P48547 511 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CDKN1CP49918 316 aaPredicted RBP6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 APLP1P51693 650 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 CASP9P55211 416 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 OR4D2P58180 307 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 LRP8Q14114 963 aa6.78□□□□□ -1.32
SYNPO2-206ENST00000610556 DAG1Q14118 895 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms