RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	TMEM26	Q6ZUK4	368 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	DET1	Q7L5Y6	550 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	JAML	Q86YT9	394 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	TRIM48	Q8IWZ4	208 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	BEND7	Q8N7W2	519 aa	Predicted RBP	15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	STYX	Q8WUJ0	223 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	NCSTN	Q92542	709 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	ULK4	Q96C45	1275 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	SGF29	Q96ES7	293 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	DPH1	Q9BZG8	443 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	EPB41L1	Q9H4G0	881 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	FAM96A	Q9H5X1	160 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	POT1	Q9NUX5	634 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	AKAP7	Q9P0M2	348 aa	Predicted RBP	15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	PAK5	Q9P286	719 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	WDR37	Q9Y2I8	494 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	ZKSCAN5	Q9Y2L8	839 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	SSUH2	Q9Y2M2	353 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	SLC30A1	Q9Y6M5	507 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	IGSF10	Q6WRI0	2623 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	IGLV3-16	A0A075B6K0	115 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	PRAMEF33	A0A0G2JMD5	474 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	GOLGA6L3	A6NEY3	463 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	MROH6	A6NGR9	719 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	KLK10	O43240	276 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CEP104	O60308	925 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	ZSCAN5DP	P0CG00	497 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CCL4	P13236	92 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	PBLD	P30039	288 aa	Predicted RBP	15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CXCR5	P32302	372 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	RPL22	P35268	128 aa	Known RBP	15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	MAPK9	P45984	424 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CDKN1C	P49918	316 aa	Predicted RBP	15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	MAPK10	P53779	464 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CDH17	Q12864	832 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CLCA4	Q14CN2	919 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	GPR33	Q49SQ1	333 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	BCL7A	Q4VC05	210 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	XKR5	Q6UX68	686 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CCDC89	Q8N998	374 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	MAIP1	Q8WWC4	291 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CXorf40B	Q96DE9	158 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	CDKN2AIPNL	Q96HQ2	116 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	COPS8	Q99627	209 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	ZMYND15	Q9H091	742 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	PRORY	Q9H606	182 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	SLC40A1	Q9NP59	571 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	RAB6B	Q9NRW1	208 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	OGFR	Q9NZT2	677 aa		15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	DRG1	Q9Y295	367 aa	Known RBP	15.19	■□□□□ 0.02
PLD3-223	ENST00000600948	MGAT4D	A6NG13	374 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	C9orf172	C9J069	976 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	PRAMEF10	O60809	474 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	PRSS56	P0CW18	603 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	RALB	P11234	206 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	FGF3	P11487	239 aa	Predicted RBP	15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	GRIA1	P42261	906 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	HAL	P42357	657 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	PPM1F	P49593	454 aa	Predicted RBP	15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	ARSD	P51689	593 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	CLN3	Q13286	438 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	CCDC38	Q502W7	563 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	ZRANB3	Q5FWF4	1079 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	METRNL	Q641Q3	311 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	ARHGAP22	Q7Z5H3	698 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	RBM12B	Q8IXT5	1001 aa	Known RBP	15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	DNAAF3	Q8N9W5	541 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	AGBL5	Q8NDL9	886 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	OR2L2	Q8NH16	312 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	USP7	Q93009	1102 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	DCUN1D1	Q96GG9	259 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	LINC00615	Q96LM1	132 aa	Predicted RBP	15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	B3GNT4	Q9C0J1	378 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	CASS4	Q9NQ75	786 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	ZDHHC3	Q9NYG2	299 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	FOXJ2	Q9P0K8	574 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	PSMD13	Q9UNM6	376 aa		15.18	■□□□□ 0.02
PLD3-223	ENST00000600948	MN1	Q10571	1320 aa	Predicted RBP	15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	CCDC78	A2IDD5	438 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	KLHL33	A6NCF5	533 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	CFAP99	D6REC4	459 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948		E7EVH7	732 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	ATP1B2	P14415	290 aa	Predicted RBP	15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	ACRV1	P26436	265 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	CSTF2	P33240	577 aa	Known RBP eCLIP	15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	KCNJ1	P48048	391 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	LMAN1	P49257	510 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	PRLHR	P49683	370 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	GPR18	Q14330	331 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	RPE65	Q16518	533 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	SNAP47	Q5SQN1	464 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	BROX	Q5VW32	411 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	PPP1R21	Q6ZMI0	780 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	SERPINA9	Q86WD7	417 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	REXO1L1P	Q8IX06	675 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	PIANP	Q8IYJ0	282 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	PRELID2	Q8N945	189 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	GPR150	Q8NGU9	434 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	HEXDC	Q8WVB3	486 aa		15.17	■□□□□ 0.02
PLD3-223	ENST00000600948	HEATR9	A2RTY3	570 aa		15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms