RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
LSM4-206ENST00000600289 KNTC1P50748 2209 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 CFAP99D6REC4 459 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 ZNF185O15231 689 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 PPM1DO15297 605 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 B4GAT1O43505 415 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 SGTAO43765 313 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 KRT14P02533 472 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 XRCC1P18887 633 aaPredicted RBP15.9■□□□□ 0.14
LSM4-206ENST00000600289 ACRV1P26436 265 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 NPY2RP49146 381 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 UBE2IP63279 158 aaKnown RBP15.9■□□□□ 0.14
LSM4-206ENST00000600289 GPLD1P80108 840 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 PLA2G4EQ3MJ16 856 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 LRRC8BQ6P9F7 803 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 ZNF534Q76KX8 674 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 SLC9B2Q86UD5 537 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 AMZ2Q86W34 360 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 PPHLN1Q8NEY8 458 aaKnown RBP15.9■□□□□ 0.14
LSM4-206ENST00000600289 SLCO2A1Q92959 643 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 SH3KBP1Q96B97 665 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 LIN37Q96GY3 246 aaPredicted RBP15.9■□□□□ 0.14
LSM4-206ENST00000600289 UCK1Q9HA47 277 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 ZDHHC3Q9NYG2 299 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 SMARCAL1Q9NZC9 954 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 PCDHB1Q9Y5F3 818 aa15.9■□□□□ 0.14
LSM4-206ENST00000600289 CCL22O00626 93 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 CASC3O15234 703 aaKnown RBP15.89■□□□□ 0.13
LSM4-206ENST00000600289 POP7O75817 140 aaKnown RBP15.89■□□□□ 0.13
LSM4-206ENST00000600289 DXOO77932 396 aaKnown RBP15.89■□□□□ 0.13
LSM4-206ENST00000600289 CPNE6O95741 557 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 IDSP22304 550 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 FOXN2P32314 431 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 PRLHRP49683 370 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 ARSDP51689 593 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 EPHA4P54764 986 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 HHEXQ03014 270 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 GPS1Q13098 491 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 EIF3IQ13347 325 aaKnown RBP15.89■□□□□ 0.13
LSM4-206ENST00000600289 ITIH4Q14624 930 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 CCDC38Q502W7 563 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 PCID2Q5JVF3 399 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 TMEM220Q6QAJ8 160 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 AFTPHQ6ULP2 937 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 OR2L2Q8NH16 312 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 DCUN1D1Q96GG9 259 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 TMEM74Q96NL1 305 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 DPYSL5Q9BPU6 564 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.89■□□□□ 0.13
LSM4-206ENST00000600289 OSGEPL1Q9H4B0 414 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 MRM3Q9HC36 420 aaKnown RBP15.89■□□□□ 0.13
LSM4-206ENST00000600289 PRDM8Q9NQV8 689 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 SAR1BQ9Y6B6 198 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 KIF26BQ2KJY2 2108 aa15.89■□□□□ 0.13
LSM4-206ENST00000600289 UBR5O95071 2799 aaPredicted RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 IGHV1OR21-1A0A087WYE8 117 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 C17orf113A0A1B0GUU1 675 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 CTAGE9A4FU28 777 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 MGAT4DA6NG13 374 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 LILRA5A6NI73 299 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 OR2AG2A6NM03 316 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 SNX2O60749 519 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 AP2A2O94973 939 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 GSTM1P09488 218 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 MLNP12872 115 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 ATP1B2P14415 290 aaPredicted RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 BRAFP15056 766 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 CD1CP29017 333 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 EIF2S3P41091 472 aaKnown RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 MLLT3P42568 568 aaPredicted RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 LSSP48449 732 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 OR1D5P58170 312 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 SARNPP82979 210 aaKnown RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 GSTM4Q03013 218 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 ZFP36L1Q07352 338 aaKnown RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 BIRC2Q13490 618 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 ZRANB3Q5FWF4 1079 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 FNBP1LQ5T0N5 605 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 LYPLAL1Q5VWZ2 237 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 METRNLQ641Q3 311 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 PACS1Q6VY07 963 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 SERPINA9Q86WD7 417 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 CREG2Q8IUH2 290 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 SLITRK4Q8IW52 837 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 RBM12BQ8IXT5 1001 aaKnown RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 Q8N9G6 341 aaPredicted RBP15.88■□□□□ 0.13
LSM4-206ENST00000600289 MCUQ8NE86 351 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 SGF29Q96ES7 293 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 ATXN7L3BQ96GX2 97 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 EPB41L1Q9H4G0 881 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 FAM96AQ9H5X1 160 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 TREX1Q9NSU2 369 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 POT1Q9NUX5 634 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 BFARQ9NZS9 450 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 CPNE7Q9UBL6 633 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 RNF14Q9UBS8 474 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 PCYOX1Q9UHG3 505 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 DNAJC16Q9Y2G8 782 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 PCDHGA8Q9Y5G5 932 aa15.88■□□□□ 0.13
LSM4-206ENST00000600289 CCDC187A0A096LP49 1063 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms