RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 WDR36Q8NI36 951 aaKnown RBP27.68■■■□□ 2.02
SSBP4-206ENST00000599699 CXorf40BQ96DE9 158 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 ZNF778Q96MU6 729 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 NUDT22Q9BRQ3 303 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 IL22Q9GZX6 179 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 WASH6PQ9NQA3 447 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 CHRAC1Q9NRG0 131 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 RIMKLBQ9ULI2 386 aa27.68■■■□□ 2.02
SSBP4-206ENST00000599699 CCDC187A0A096LP49 1063 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 TCRBV7S3A2A0A539 114 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 MGAT4DA6NG13 374 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 AGRPO00253 132 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 BRAFP15056 766 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 XRCC1P18887 633 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-206ENST00000599699 UBE2IP63279 158 aaKnown RBP27.67■■■□□ 2.02
SSBP4-206ENST00000599699 PRAMEP78395 509 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 GPLD1P80108 840 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 DBN1Q16643 649 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 AFTPHQ6ULP2 937 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 FAM83HQ6ZRV2 1179 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-206ENST00000599699 TMPRSS9Q7Z410 1059 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 PSMD13Q9UNM6 376 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 SAR1BQ9Y6B6 198 aa27.67■■■□□ 2.02
SSBP4-206ENST00000599699 UNC13CQ8NB66 2214 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 OR52A4PA6NMU1 304 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 TAF4O00268 1085 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 GOT2P00505 430 aaKnown RBP27.66■■■□□ 2.02
SSBP4-206ENST00000599699 MGAT1P26572 445 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 CCKBRP32239 447 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 SLC19A1P41440 591 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 KCNJ11Q14654 390 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 PPP1R7Q15435 360 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 CLPPQ16740 277 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-206ENST00000599699 LRRC8BQ6P9F7 803 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 LSMEM2Q8N112 164 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 OR2L2Q8NH16 312 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 LIN37Q96GY3 246 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-206ENST00000599699 TTC1Q99614 292 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 SEMA6CQ9H3T2 930 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 ZNF624Q9P2J8 865 aaPredicted RBP27.66■■■□□ 2.02
SSBP4-206ENST00000599699 WDR37Q9Y2I8 494 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 RAXQ9Y2V3 346 aa27.66■■■□□ 2.02
SSBP4-206ENST00000599699 USP24Q9UPU5 2620 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 IGLV3-16A0A075B6K0 115 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 KLHL33A6NCF5 533 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 SGTAO43765 313 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 DUX1O43812 170 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 RBMS1P29558 406 aaKnown RBP27.65■■■□□ 2.02
SSBP4-206ENST00000599699 FOXN2P32314 431 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 PRLHRP49683 370 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 ZFP36L1Q07352 338 aaKnown RBP27.65■■■□□ 2.02
SSBP4-206ENST00000599699 CLCA4Q14CN2 919 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 RAB11FIP2Q7L804 512 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 OR4L1Q8NH43 312 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 DDX47Q9H0S4 455 aaKnown RBP27.65■■■□□ 2.02
SSBP4-206ENST00000599699 VPS37BQ9H9H4 285 aa27.65■■■□□ 2.02
SSBP4-206ENST00000599699 COL27A1Q8IZC6 1860 aaPredicted RBP27.65■■■□□ 2.02
SSBP4-206ENST00000599699 A0A1W2PNU3 283 aaPredicted RBP27.64■■■□□ 2.02
SSBP4-206ENST00000599699 SRRM3A6NNA2 597 aaPredicted RBP27.64■■■□□ 2.02
SSBP4-206ENST00000599699 ACVR1Q04771 509 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 FASTKD1Q53R41 847 aaKnown RBP27.64■■■□□ 2.02
SSBP4-206ENST00000599699 LYPLAL1Q5VWZ2 237 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 ANKRD22Q5VYY1 191 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 METRNLQ641Q3 311 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 ZNF534Q76KX8 674 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 SLITRK4Q8IW52 837 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 CFAP206Q8IYR0 622 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 C17orf53Q8N3J3 647 aaPredicted RBP27.64■■■□□ 2.02
SSBP4-206ENST00000599699 FBXO39Q8N4B4 442 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 CLDN19Q8N6F1 224 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 CPT1BQ92523 772 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 PEX13Q92968 403 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 LINC00615Q96LM1 132 aaPredicted RBP27.64■■■□□ 2.02
SSBP4-206ENST00000599699 DPYSL5Q9BPU6 564 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 TBC1D10AQ9BXI6 508 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 POT1Q9NUX5 634 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 SYBUQ9NX95 663 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 ACSL5Q9ULC5 683 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 NEU2Q9Y3R4 380 aa27.64■■■□□ 2.02
SSBP4-206ENST00000599699 WDFY3Q8IZQ1 3526 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 PMS2P1A4D2B8 440 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 POLBP06746 335 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 HOXB3P14651 431 aaPredicted RBP27.63■■■□□ 2.01
SSBP4-206ENST00000599699 MPSTP25325 297 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 MAGEA6P43360 314 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 EPHA4P54764 986 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 EIF3IQ13347 325 aaKnown RBP27.63■■■□□ 2.01
SSBP4-206ENST00000599699 ITIH4Q14624 930 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 TMEM26Q6ZUK4 368 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 NCSTNQ92542 709 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 CCM2Q9BSQ5 444 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 WWP1Q9H0M0 922 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 AKAP7Q9P0M2 348 aaPredicted RBP27.63■■■□□ 2.01
SSBP4-206ENST00000599699 ANAPC5Q9UJX4 755 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 PCDHGA8Q9Y5G5 932 aa27.63■■■□□ 2.01
SSBP4-206ENST00000599699 IGHV5-10-1A0A0J9YXX1 117 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 LILRA5A6NI73 299 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 GOLGA8MH3BSY2 632 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 PLD2O14939 933 aa27.62■■■□□ 2.01
SSBP4-206ENST00000599699 AVILO75366 819 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms