RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PACS1Q6VY07 963 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 LDB1Q86U70 411 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 TMEM135Q86UB9 458 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 AGGF1Q8N302 714 aaeCLIP19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 ARL14Q8N4G2 192 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 CCDC74AQ96AQ1 378 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 VPS37BQ9H9H4 285 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 PRDM8Q9NQV8 689 aa19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 MARCH4Q9P2E8 410 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-214ENST00000597396 USP24Q9UPU5 2620 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 KLHL33A6NCF5 533 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 MGAT4DA6NG13 374 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 OR5K4A6NMS3 321 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 GOLGA8KD6RF30 607 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 F8W8V4 182 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 GOLGA8TH3BQL2 631 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 QSOX1O00391 747 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 SGTAO43765 313 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 AP2A2O94973 939 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 EML2O95834 649 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 GLB1P16278 677 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 ARNTP27540 789 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 DMPKQ09013 629 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 THOC5Q13769 683 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 NFE2L1Q14494 772 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 MSS51Q4VC12 460 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 DUPD1Q68J44 220 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 MRNIPQ6NTE8 343 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 SDCCAG8Q86SQ7 713 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 C17orf82Q86X59 251 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 CHCHD4Q8N4Q1 142 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 CLDN19Q8N6F1 224 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 SLC37A2Q8TED4 501 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 LINC00615Q96LM1 132 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 PWWP2AQ96N64 755 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 FCRL3Q96P31 734 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 EBNA1BP2Q99848 306 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 CCDC3Q9BQI4 270 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 NAT9Q9BTE0 207 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 ABCG4Q9H172 646 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 STN1Q9H668 368 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 LRIT1Q9P2V4 623 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 RNF215Q9Y6U7 377 aa19.32■□□□□ 0.68
SHKBP1-214ENST00000597396 RHPN2P1A8MT19 583 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 PFDN6O15212 129 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 NUDT21O43809 227 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 NDUFS3O75489 264 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 OR56A5P0C7T3 313 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 RPL10P27635 214 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 IYDQ6PHW0 289 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 RAB44Q7Z6P3 723 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 MMGT1Q8N4V1 131 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 CEP112Q8N8E3 955 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 OR2L2Q8NH16 312 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 HM13Q8TCT9 377 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 CCM2Q9BSQ5 444 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 LRRC1Q9BTT6 524 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 SYNDIG1Q9H7V2 258 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 CHMP2BQ9UQN3 213 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 PRSS21Q9Y6M0 314 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 KNTC1P50748 2209 aa19.31■□□□□ 0.68
SHKBP1-214ENST00000597396 KIR2DS5A0A0G2JLQ3 304 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 A0A0G2JNG1 304 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 ZCWPW2A0A1B0GU75 182 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 A6NCN8 305 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 PRR19A6NJB7 356 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 KIR2DS3K7RE56 304 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 HYAL3O43820 417 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 OR1I1O60431 355 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 TTC4O95801 387 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 FTH1P02794 183 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 ELK3P41970 407 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 HALP42357 657 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 ARCN1P48444 511 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 DRG2P55039 364 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 SLC7A5Q01650 507 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 CRYMQ14894 314 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 KIR2DS5Q14953 304 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 LONRF1Q17RB8 773 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 HP1BP3Q5SSJ5 553 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 NEPROQ6NW34 567 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 FAM83HQ6ZRV2 1179 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 SLC9B2Q86UD5 537 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 TRIM48Q8IWZ4 208 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 SFRP1Q8N474 314 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 LRRC39Q96DD0 335 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 CFAP36Q96G28 342 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 C20orf96Q9NUD7 363 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 IL1RAPL1Q9NZN1 696 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 FAM169AQ9Y6X4 670 aa19.3■□□□□ 0.68
SHKBP1-214ENST00000597396 UBA6A0AVT1 1052 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 PRMT5O14744 637 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 TP73O15350 636 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 OPA1O60313 960 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 GSTM1P09488 218 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 PNLIPP16233 465 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 SPINK2P20155 84 aa19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 OGNP20774 298 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-214ENST00000597396 GSTM4Q03013 218 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms