RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 RDH14Q9HBH5 336 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 SARS2Q9NP81 518 aaKnown RBP10.95□□□□□ -0.66
VRK3-210ENST00000596121 WASH6PQ9NQA3 447 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 TMEM9Q9P0T7 183 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 CPNE7Q9UBL6 633 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 FAM8A1Q9UBU6 413 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 PCYOX1Q9UHG3 505 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 PSMD13Q9UNM6 376 aa10.95□□□□□ -0.66
VRK3-210ENST00000596121 DNMT3AQ9Y6K1 912 aaPredicted RBP10.95□□□□□ -0.66
VRK3-210ENST00000596121 IGHV1OR21-1A0A087WYE8 117 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 KIR2DS5A0A0G2JLQ3 304 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 A0A0G2JNG1 304 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 MGAT4DA6NG13 374 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 PDZK1P1A8MUH7 402 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 KIR2DS3K7RE56 304 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 TCEA3O75764 348 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 GAS8O95995 478 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 MPOP05164 745 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 ATP1B2P14415 290 aaPredicted RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 XRCC1P18887 633 aaPredicted RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 IDSP22304 550 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 MAGEA3P43357 314 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 GPR3P46089 330 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 PRLHRP49683 370 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 ETF1P62495 437 aaKnown RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 MRPS25P82663 173 aaKnown RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 ZFP36L1Q07352 338 aaKnown RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 PTK6Q13882 451 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 KIR2DS5Q14953 304 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 RTP5Q14D33 572 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 RNASEH2BQ5TBB1 312 aaKnown RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 SYT10Q6XYQ8 523 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 SLITRK4Q8IW52 837 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 MCUQ8NE86 351 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 PPHLN1Q8NEY8 458 aaKnown RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 OR2L2Q8NH16 312 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 OR4L1Q8NH43 312 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 MFSD3Q96ES6 412 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 DCUN1D1Q96GG9 259 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 FCRL3Q96P31 734 aaPredicted RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 INSM2Q96T92 566 aaPredicted RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 TBC1D10AQ9BXI6 508 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 ZCCHC2Q9C0B9 1178 aaKnown RBP10.94□□□□□ -0.66
VRK3-210ENST00000596121 NRSN2Q9GZP1 204 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 IL22Q9GZX6 179 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 BFARQ9NZS9 450 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 OGFRQ9NZT2 677 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 LAMA5O15230 3695 aa10.94□□□□□ -0.66
VRK3-210ENST00000596121 ACACAQ13085 2346 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 GOLGA6L10A0A0M3HER8 536 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 AGRPO00253 132 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 TP73O15350 636 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 POLBP06746 335 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 MPSTP25325 297 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 ARCN1P48444 511 aaKnown RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 HHEXQ03014 270 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 SQSTM1Q13501 440 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 RPE65Q16518 533 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 AFTPHQ6ULP2 937 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 NAPRTQ6XQN6 538 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 NLRP9Q7RTR0 991 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 CFAP206Q8IYR0 622 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 GPR150Q8NGU9 434 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 OR6P1Q8NGX9 317 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 WDR48Q8TAF3 677 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 LKAAEAR1Q8TD35 194 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 JPH3Q8WXH2 748 aaPredicted RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 ZCCHC14Q8WYQ9 949 aaKnown RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 SGSM3Q96HU1 749 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 ZNF514Q96K75 400 aaPredicted RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 SIGLEC10Q96LC7 697 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 RMDN2Q96LZ7 410 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 PWWP2AQ96N64 755 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 SERPINB12Q96P63 405 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 NRTNQ99748 197 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 WWP1Q9H0M0 922 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 CCDC86Q9H6F5 360 aaKnown RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 MRM3Q9HC36 420 aaKnown RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 KCNK4Q9NYG8 393 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 ZMIZ1Q9ULJ6 1067 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 SOX13Q9UN79 622 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 SATB2Q9UPW6 733 aa10.93□□□□□ -0.66
VRK3-210ENST00000596121 CFAP20Q9Y6A4 193 aaKnown RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 ANKRD11Q6UB99 2663 aaPredicted RBP10.93□□□□□ -0.66
VRK3-210ENST00000596121 IGHV5-10-1A0A0J9YXX1 117 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 OR5K4A6NMS3 321 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 GOLGA8KD6RF30 607 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 GOLGA8TH3BQL2 631 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 CD3EAPO15446 510 aaKnown RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 TTI1O43156 1089 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 TLX3O43711 291 aaPredicted RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 BRINP1O60477 761 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 KCNJ13O60928 360 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 BANF1O75531 89 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 CPNE6O95741 557 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 F7P08709 466 aaPredicted RBP10.92□□□□□ -0.66
VRK3-210ENST00000596121 MLNP12872 115 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 HGFP14210 728 aa10.92□□□□□ -0.66
VRK3-210ENST00000596121 PDHA2P29803 388 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms