RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 WASH6PQ9NQA3 447 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 ZDHHC3Q9NYG2 299 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 TCAF1Q9Y4C2 921 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 PCDHGA8Q9Y5G5 932 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 DNMT3AQ9Y6K1 912 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC30A1Q9Y6M5 507 aa10.79□□□□□ -0.68
SHKBP1-206ENST00000595523 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 IGHV5-10-1A0A0J9YXX1 117 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 MGAT4DA6NG13 374 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 LILRA5A6NI73 299 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 OR5K4A6NMS3 321 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 PDZK1P1A8MUH7 402 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 AGRPO00253 132 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 CES2O00748 559 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 TMEM63AO94886 807 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 KRT14P02533 472 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 HGFP14210 728 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC2A4P14672 509 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 TPSB2P20231 275 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 IDSP22304 550 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 ADRA1DP25100 572 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 PBLDP30039 288 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 MAGEA6P43360 314 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 PRLHRP49683 370 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 VPS41P49754 854 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 CRADDP78560 199 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 GPLD1P80108 840 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 CACNG1Q06432 222 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 BIRC2Q13490 618 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 C16orf72Q14CZ0 275 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 TPSAB1Q15661 275 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 DBN1Q16643 649 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 CLPPQ16740 277 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 SKIDA1Q1XH10 827 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 ZRANB3Q5FWF4 1079 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 ANKRD22Q5VYY1 191 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 CCDC137Q6PK04 289 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 C4orf22Q6V702 233 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 RAB11FIP2Q7L804 512 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 PIM3Q86V86 326 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 RCBTB1Q8NDN9 531 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 GPR150Q8NGU9 434 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 WDR36Q8NI36 951 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 HDAC10Q969S8 669 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 MAGOHBQ96A72 148 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 LINC00615Q96LM1 132 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 TMEM74Q96NL1 305 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC46A1Q96NT5 459 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 SLC38A3Q99624 504 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 TBC1D10AQ9BXI6 508 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 OGFRQ9NZT2 677 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 RIMKLBQ9ULI2 386 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 PSMD13Q9UNM6 376 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 CACNA1GO43497 2377 aa10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 SMG1Q96Q15 3661 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-206ENST00000595523 A0A087WV48 116 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 CDRT15L2A8MXV6 281 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 KCNJ13O60928 360 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 PHF2O75151 1096 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 GOT2P00505 430 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 THRAP10827 490 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 SPTBP11277 2137 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 ATP1B2P14415 290 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 VCLP18206 1134 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 MPSTP25325 297 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 ETV5P41161 510 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 LIMK2P53671 638 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 TERF1P54274 439 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 EPHA4P54764 986 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 SESN2P58004 480 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 GNG11P61952 73 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 GPS1Q13098 491 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 SEMA3AQ14563 771 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 PHF19Q5T6S3 580 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 PAPD7Q5XG87 772 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 TMEM26Q6ZUK4 368 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 TAS2R42Q7RTR8 314 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 LSMEM2Q8N112 164 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 CLDN19Q8N6F1 224 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 OR4D9Q8NGE8 314 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 OR2L2Q8NH16 312 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 CPT1BQ92523 772 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 FGF11Q92914 225 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 DCUN1D1Q96GG9 259 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 CCDC74BQ96LY2 380 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 NAP1L3Q99457 506 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 UCK1Q9HA47 277 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 SLC40A1Q9NP59 571 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 CHRAC1Q9NRG0 131 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 TREX1Q9NSU2 369 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 POT1Q9NUX5 634 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 PDP2Q9P2J9 529 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 FAM8A1Q9UBU6 413 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 LOXL2Q9Y4K0 774 aa10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 PRSS21Q9Y6M0 314 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms