RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 HGSO14964 777 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 JMJD7P0C870 316 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 PRSS56P0CW18 603 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 THRAP10827 490 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 VCLP18206 1134 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC5A2P31639 672 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 MC4RP32245 332 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 TRA2AQ13595 282 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 NFE2L1Q14494 772 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 WDR74Q6RFH5 385 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 TMEM26Q6ZUK4 368 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 CCDC89Q8N998 374 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 MAIP1Q8WWC4 291 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 ULK4Q96C45 1275 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 AHCYL2Q96HN2 611 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 ZNF514Q96K75 400 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC40A1Q9NP59 571 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 PAK5Q9P286 719 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 PISDQ9UG56 409 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 CRLS1Q9UJA2 301 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 SLC30A1Q9Y6M5 507 aa18.15■□□□□ 0.5
SHKBP1-202ENST00000593764 IGLV3-16A0A075B6K0 115 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 NVLO15381 856 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 DUX1O43812 170 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 VIPP01282 170 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 CCL4P13236 92 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 ITGALP20701 1170 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 KCNJ1P48048 391 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 ARSDP51689 593 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 CDH17Q12864 832 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 SEPT6Q14141 434 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 GPR33Q49SQ1 333 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 BCL7AQ4VC05 210 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 CCDC38Q502W7 563 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 METRNLQ641Q3 311 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 PIANPQ8IYJ0 282 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 PRELID2Q8N945 189 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 NCSTNQ92542 709 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 LINC00615Q96LM1 132 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 CASS4Q9NQ75 786 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 OGFRQ9NZT2 677 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 SSUH2Q9Y2M2 353 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 JRKLQ9Y4A0 524 aa18.14■□□□□ 0.49
SHKBP1-202ENST00000593764 CCDC78A2IDD5 438 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 MGAT4DA6NG13 374 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 FGF3P11487 239 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 KCTD19Q17RG1 926 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 ARHGAP22Q7Z5H3 698 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 PDZD3Q86UT5 571 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 TRIM48Q8IWZ4 208 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 RASGEF1CQ8N431 466 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 DNAAF3Q8N9W5 541 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 OR2L2Q8NH16 312 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 KCNE4Q8WWG9 221 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 COPS8Q99627 209 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 DPH1Q9BZG8 443 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 POT1Q9NUX5 634 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 ZDHHC3Q9NYG2 299 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 ACSL6Q9UKU0 697 aa18.13■□□□□ 0.49
SHKBP1-202ENST00000593764 C9orf172C9J069 976 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 E7EVH7 732 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 APRTP07741 180 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 ATP1B2P14415 290 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 ACRV1P26436 265 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 PBLDP30039 288 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 LMAN1P49257 510 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 RPE65Q16518 533 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 SKIDA1Q1XH10 827 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 ZRANB3Q5FWF4 1079 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 PPP1R21Q6ZMI0 780 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 SERPINA9Q86WD7 417 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 JAMLQ86YT9 394 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 OR13J1Q8NGT2 312 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 USP7Q93009 1102 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 DCUN1D1Q96GG9 259 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 ZNF778Q96MU6 729 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 EPB41L1Q9H4G0 881 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 PRORYQ9H606 182 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 PSMD13Q9UNM6 376 aa18.12■□□□□ 0.49
SHKBP1-202ENST00000593764 KLHL33A6NCF5 533 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 OR51F1A6NGY5 319 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 KLK10O43240 276 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 PRAMEF10O60809 474 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 UBXN7O94888 489 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 RALBP11234 206 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 TYRP1P17643 537 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 MAPK9P45984 424 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 PRLHRP49683 370 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 MAPK10P53779 464 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 CACNG1Q06432 222 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 GPR18Q14330 331 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 ZNF658BQ4V348 819 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 RBM12BQ8IXT5 1001 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 LILRA3Q8N6C8 439 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 AGBL5Q8NDL9 886 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 GPR150Q8NGU9 434 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 HEXDCQ8WVB3 486 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 CXorf40BQ96DE9 158 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 MS4A14Q96JA4 679 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms