RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FOXJ2Q9P0K8 574 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 CRLS1Q9UJA2 301 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 PTPRQQ9UMZ3 2332 aa15□□□□□ -0.01
TRIM28-203ENST00000593582 KLHL33A6NCF5 533 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 EIF4E1BA6NMX2 242 aaKnown RBP14.99□□□□□ -0.01
TRIM28-203ENST00000593582 EFCAB7A8K855 629 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 A8MU76 341 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 B4E171 279 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 LDB2O43679 373 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 LIASO43766 372 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 UBXN7O94888 489 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 IFNB1P01574 187 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 AMD1P17707 334 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 ITGALP20701 1170 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 TSPAN7P41732 249 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 XIAPP98170 497 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 CLCA4Q14CN2 919 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 OASLQ15646 514 aaKnown RBP14.99□□□□□ -0.01
TRIM28-203ENST00000593582 MEI1Q5TIA1 1274 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 CCDC81Q6ZN84 652 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 ZNF662Q6ZS27 426 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 DET1Q7L5Y6 550 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 SNX20Q7Z614 316 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 LINC00523Q86TU6 105 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 TAB3Q8N5C8 712 aaPredicted RBP14.99□□□□□ -0.01
TRIM28-203ENST00000593582 RTP4Q96DX8 246 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 SGF29Q96ES7 293 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 ASPSCR1Q9BZE9 553 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 SLC40A1Q9NP59 571 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 SLC39A1Q9NY26 324 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 KLHL3Q9UH77 587 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 ZNF148Q9UQR1 794 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 WDR37Q9Y2I8 494 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 PCDHGA3Q9Y5H0 932 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 SLC30A1Q9Y6M5 507 aa14.99□□□□□ -0.01
TRIM28-203ENST00000593582 ERI2A8K979 691 aaKnown RBP14.98□□□□□ -0.01
TRIM28-203ENST00000593582 AGAP14A8MT82 685 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 CFAP99D6REC4 459 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 STMND1H3BQB6 276 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 TYRP1P17643 537 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 TPH1P17752 444 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 PBLDP30039 288 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-203ENST00000593582 RAB15P59190 212 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 SEPT6Q14141 434 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 NFE2L1Q14494 772 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 POU6F1Q14863 301 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 TGIF1Q15583 401 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 DCAF12Q5T6F0 453 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 METRNLQ641Q3 311 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 ARHGAP22Q7Z5H3 698 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 ZFAND4Q86XD8 727 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 NXPE1Q8N323 547 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 BEND7Q8N7W2 519 aaPredicted RBP14.98□□□□□ -0.01
TRIM28-203ENST00000593582 HEXDCQ8WVB3 486 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 SNRNP27Q8WVK2 155 aaKnown RBP14.98□□□□□ -0.01
TRIM28-203ENST00000593582 C1orf54Q8WWF1 131 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 ART4Q93070 314 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 DNAJC1Q96KC8 554 aaKnown RBP14.98□□□□□ -0.01
TRIM28-203ENST00000593582 DDA1Q9BW61 102 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 ACSL5Q9ULC5 683 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 PSMD13Q9UNM6 376 aa14.98□□□□□ -0.01
TRIM28-203ENST00000593582 MN1Q10571 1320 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 ATMQ13315 3056 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 MGAT4DA6NG13 374 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 E7EVH7 732 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 K7ENP7 123 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 CCL22O00626 93 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 GAS8O95995 478 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 MC4RP32245 332 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 FDFT1P37268 417 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 LMAN1P49257 510 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 SNX1Q13596 522 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 GPR18Q14330 331 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 GPR33Q49SQ1 333 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 BCL7AQ4VC05 210 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 INO80CQ6PI98 192 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 FAM83HQ6ZRV2 1179 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 CCDC89Q8N998 374 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 DNAAF3Q8N9W5 541 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 TRIM58Q8NG06 486 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 OR2L2Q8NH16 312 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 BBC3Q96PG8 261 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 COPS8Q99627 209 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 FAM96AQ9H5X1 160 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 NLE1Q9NVX2 485 aaPredicted RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 PIH1D1Q9NWS0 290 aaKnown RBP14.97□□□□□ -0.01
TRIM28-203ENST00000593582 OCIAD1Q9NX40 245 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 OGFRQ9NZT2 677 aa14.97□□□□□ -0.01
TRIM28-203ENST00000593582 H7C0S8 307 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 C9P02748 559 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 ANKRD34CP0C6C1 535 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 ATP1B2P14415 290 aaPredicted RBP14.96□□□□□ -0.01
TRIM28-203ENST00000593582 CAPZBP47756 277 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 RHDQ02161 417 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 RPE65Q16518 533 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 SKIDA1Q1XH10 827 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 ZRANB3Q5FWF4 1079 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 MANEAQ5SRI9 462 aa14.96□□□□□ -0.01
TRIM28-203ENST00000593582 DTX1Q86Y01 620 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms