RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 LMAN1P49257 510 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 CTSCP53634 463 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 TMPRSS15P98073 1019 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 DMPKQ09013 629 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 TAF1BQ53T94 588 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 MANEAQ5SRI9 462 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 FNBP1LQ5T0N5 605 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 DCAF12Q5T6F0 453 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 DET1Q7L5Y6 550 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 C11orf96Q7Z7L8 435 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 ZFAND4Q86XD8 727 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 ZSCAN1Q8NBB4 408 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 LSM14AQ8ND56 463 aaKnown RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 OR13C4Q8NGS5 318 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 ART4Q93070 314 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 TRIM44Q96DX7 344 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 TEFMQ96QE5 360 aaKnown RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 FOXJ2Q9P0K8 574 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 ZNF624Q9P2J8 865 aaPredicted RBP12.16□□□□□ -0.46
SS18-225ENST00000585121 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 ZNF148Q9UQR1 794 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 PCDHGA3Q9Y5H0 932 aa12.16□□□□□ -0.46
SS18-225ENST00000585121 TCRBV7S2A1N4TA0A589 114 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 PRR19A6NJB7 356 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 OR52A4PA6NMU1 304 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 K7ENP7 123 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 TK2O00142 265 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 ATXN7O15265 892 aaPredicted RBP12.15□□□□□ -0.46
SS18-225ENST00000585121 GPR39O43194 453 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 METTL18O95568 372 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 AP2A1O95782 977 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 IFNB1P01574 187 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 BRAFP15056 766 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 TYRP1P17643 537 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 FDFT1P37268 417 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 ATP1A2P50993 1020 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 ZNF140P52738 457 aaPredicted RBP12.15□□□□□ -0.46
SS18-225ENST00000585121 GDF10P55107 478 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 SEPT6Q14141 434 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 KCTD11Q693B1 232 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 INO80CQ6PI98 192 aaPredicted RBP12.15□□□□□ -0.46
SS18-225ENST00000585121 ARHGAP22Q7Z5H3 698 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 SNX20Q7Z614 316 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 SLC13A5Q86YT5 568 aaPredicted RBP12.15□□□□□ -0.46
SS18-225ENST00000585121 KLHDC8BQ8IXV7 354 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 RTP4Q96DX8 246 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 SGF29Q96ES7 293 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 COPS8Q99627 209 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 ZPBPQ9BS86 351 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 DDA1Q9BW61 102 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 SLC40A1Q9NP59 571 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 LZTFL1Q9NQ48 299 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 ACSL5Q9ULC5 683 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 BPTFQ12830 3046 aa12.15□□□□□ -0.46
SS18-225ENST00000585121 ATRXP46100 2492 aa12.15□□□□□ -0.47
SS18-225ENST00000585121 MGAT4DA6NG13 374 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 ERI2A8K979 691 aaKnown RBP12.14□□□□□ -0.47
SS18-225ENST00000585121 E7EVH7 732 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 ERVH48-1M5A8F1 160 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 LIASO43766 372 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 TPH1P17752 444 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 MC4RP32245 332 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 XIAPP98170 497 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 LAMB3Q13751 1172 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 POU6F1Q14863 301 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 CLCA4Q14CN2 919 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 TGIF1Q15583 401 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 ZRANB3Q5FWF4 1079 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 MEI1Q5TIA1 1274 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 ZNF449Q6P9G9 518 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 CEACAM20Q6UY09 585 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 LRRC8AQ8IWT6 810 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 NXPE1Q8N323 547 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 TAB3Q8N5C8 712 aaPredicted RBP12.14□□□□□ -0.47
SS18-225ENST00000585121 CCDC89Q8N998 374 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 DNAAF3Q8N9W5 541 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 TRIM58Q8NG06 486 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 STYXQ8WUJ0 223 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
SS18-225ENST00000585121 MAIP1Q8WWC4 291 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 ATG4AQ8WYN0 398 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 ZDHHC12Q96GR4 267 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 DNAJC1Q96KC8 554 aaKnown RBP12.14□□□□□ -0.47
SS18-225ENST00000585121 VPS37BQ9H9H4 285 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 NLE1Q9NVX2 485 aaPredicted RBP12.14□□□□□ -0.47
SS18-225ENST00000585121 OCIAD1Q9NX40 245 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 B3GALT1Q9Y5Z6 326 aa12.14□□□□□ -0.47
SS18-225ENST00000585121 SMG1Q96Q15 3661 aaKnown RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 ZFC3H1O60293 1989 aaKnown RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 MN1Q10571 1320 aaPredicted RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 TOX3O15405 576 aaPredicted RBP12.13□□□□□ -0.47
SS18-225ENST00000585121 CAPN5O15484 640 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms