RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CXorf40BQ96DE9 158 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 CCDC97Q96F63 343 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 ZNF778Q96MU6 729 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 NUDT22Q9BRQ3 303 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 STRADBQ9C0K7 418 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 IL22Q9GZX6 179 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 CHRAC1Q9NRG0 131 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 BFARQ9NZS9 450 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 SCHIP1Q9P0W5 487 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 RIMKLBQ9ULI2 386 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 PSMD13Q9UNM6 376 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 SATB2Q9UPW6 733 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 SAR1BQ9Y6B6 198 aa12.38□□□□□ -0.43
SMARCE1-218ENST00000582955 IGHV1OR21-1A0A087WYE8 117 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 CCDC187A0A096LP49 1063 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 MGAT4DA6NG13 374 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 PRR19A6NJB7 356 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 OR52A4PA6NMU1 304 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 TMX2-CTNND1H3BSU7 103 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 AGRPO00253 132 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 DUX1O43812 170 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 BRINP1O60477 761 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 CAPNS1P04632 268 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 BRAFP15056 766 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 XRCC1P18887 633 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 PSMA3P25788 255 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 CD1CP29017 333 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 FOXN2P32314 431 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 SLC19A1P41440 591 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 PRLHRP49683 370 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 UBE2IP63279 158 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 GPLD1P80108 840 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 KCNJ11Q14654 390 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 DBN1Q16643 649 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 ABRAXAS1Q6UWZ7 409 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 WASH2PQ6VEQ5 465 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 FAM83HQ6ZRV2 1179 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 ZNF534Q76KX8 674 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 TMPRSS9Q7Z410 1059 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 WDR36Q8NI36 951 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 CPT1BQ92523 772 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 TTC1Q99614 292 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 DDX47Q9H0S4 455 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 POLR1BQ9H9Y6 1135 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 WASH6PQ9NQA3 447 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 SYBUQ9NX95 663 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 ZNF624Q9P2J8 865 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 DKK4Q9UBT3 224 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 WDR37Q9Y2I8 494 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 UNC13CQ8NB66 2214 aa12.37□□□□□ -0.43
SMARCE1-218ENST00000582955 FREM2Q5SZK8 3169 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 IGLV3-16A0A075B6K0 115 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 KLHL33A6NCF5 533 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 GOLGA8MH3BSY2 632 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 SGTAO43765 313 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 TMEM63AO94886 807 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CCKBRP32239 447 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 PAFAH1B1P43034 410 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 MAGEA6P43360 314 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 LSSP48449 732 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 ACVR1Q04771 509 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 ITIH4Q14624 930 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CLCA4Q14CN2 919 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CLPPQ16740 277 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 FASTKD1Q53R41 847 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 METRNLQ641Q3 311 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CREG2Q8IUH2 290 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CFAP206Q8IYR0 622 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 CLDN19Q8N6F1 224 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 OR2L2Q8NH16 312 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 OR4L1Q8NH43 312 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 PEX13Q92968 403 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 LIN37Q96GY3 246 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 LINC00615Q96LM1 132 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 TBC1D10AQ9BXI6 508 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 SEMA6CQ9H3T2 930 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 VPS37BQ9H9H4 285 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 POT1Q9NUX5 634 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 ANAPC5Q9UJX4 755 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 RAXQ9Y2V3 346 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
SMARCE1-218ENST00000582955 PRAMEF33A0A0G2JMD5 474 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 A0A1W2PNU3 283 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 PMS2P1A4D2B8 440 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 LILRA5A6NI73 299 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 TAF4O00268 1085 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 PLD2O14939 933 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 AVILO75366 819 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 POLBP06746 335 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms