RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 WDR37Q9Y2I8 494 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 SLC30A1Q9Y6M5 507 aa19.15■□□□□ 0.66
SREBF1-220ENST00000581707 PRAMEF33A0A0G2JMD5 474 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 ERI2A8K979 691 aaKnown RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 PRAMEF10O60809 474 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 RALBP11234 206 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 FGF3P11487 239 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 PBLDP30039 288 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 FDFT1P37268 417 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 HALP42357 657 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 TMPRSS3P57727 454 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 CLN3Q13286 438 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 CLCA4Q14CN2 919 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 TMEM164Q5U3C3 297 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 FAM83HQ6ZRV2 1179 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 SNX20Q7Z614 316 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 NXPE1Q8N323 547 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 BEND7Q8N7W2 519 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 CXorf40BQ96DE9 158 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 FCRL3Q96P31 734 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 TLR10Q9BXR5 811 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 B3GNT4Q9C0J1 378 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 SLC40A1Q9NP59 571 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 NLE1Q9NVX2 485 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-220ENST00000581707 SSUH2Q9Y2M2 353 aa19.14■□□□□ 0.65
SREBF1-220ENST00000581707 KLHL33A6NCF5 533 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 A8MU76 341 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 C9orf172C9J069 976 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 ETS1P14921 441 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 MC4RP32245 332 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 LMAN1P49257 510 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 CXADRP78310 365 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 NFE2L1Q14494 772 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 SIX1Q15475 284 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-220ENST00000581707 CCNG2Q16589 344 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 GPR33Q49SQ1 333 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 METRNLQ641Q3 311 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 PLXDC1Q8IUK5 500 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 RBM12BQ8IXT5 1001 aaKnown RBP19.13■□□□□ 0.65
SREBF1-220ENST00000581707 CCDC89Q8N998 374 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 DNAAF3Q8N9W5 541 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 OR52K1Q8NGK4 314 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 STYXQ8WUJ0 223 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 HEXDCQ8WVB3 486 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 MAIP1Q8WWC4 291 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 TAAR9Q96RI9 348 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 COPS8Q99627 209 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 GRPEL1Q9HAV7 217 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 FOXJ2Q9P0K8 574 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 PSMD13Q9UNM6 376 aa19.13■□□□□ 0.65
SREBF1-220ENST00000581707 LOC400499M0QZD8 3231 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 MGAQ8IWI9 3026 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 MGAT4DA6NG13 374 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 E7EVH7 732 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 H7C0S8 307 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 UBXN7O94888 489 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 GAS8O95995 478 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 FGGP02679 453 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 TYRP1P17643 537 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 AMD1P17707 334 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 CDH17Q12864 832 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 RPE65Q16518 533 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 BCL7AQ4VC05 210 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 ZRANB3Q5FWF4 1079 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 GPR155Q7Z3F1 870 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 ARHGAP22Q7Z5H3 698 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 PRUNE1Q86TP1 453 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 NAT14Q8WUY8 206 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 CDKN2AIPNLQ96HQ2 116 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 CPNE5Q9HCH3 593 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 RAB6BQ9NRW1 208 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 WDR70Q9NW82 654 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 OCIAD1Q9NX40 245 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 OGFRQ9NZT2 677 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 PAK5Q9P286 719 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 KLHL3Q9UH77 587 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 ZKSCAN5Q9Y2L8 839 aa19.12■□□□□ 0.65
SREBF1-220ENST00000581707 MROH6A6NGR9 719 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 CFAP99D6REC4 459 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 SGTAO43765 313 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 CEP104O60308 925 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 SUN1O94901 812 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 ATP1B2P14415 290 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-220ENST00000581707 CD82P27701 267 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 CDKN1CP49918 316 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-220ENST00000581707 SEMA5AQ13591 1074 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 GPR18Q14330 331 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 DRICH1Q6PGQ1 229 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-220ENST00000581707 PPP1R21Q6ZMI0 780 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 TAS2R42Q7RTR8 314 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 ZFAND4Q86XD8 727 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 FAM129CQ86XR2 697 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 GLIS1Q8NBF1 620 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 OR2L2Q8NH16 312 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 ART4Q93070 314 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 LINC00615Q96LM1 132 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-220ENST00000581707 SLC39A1Q9NY26 324 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 ZDHHC3Q9NYG2 299 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 ACSL5Q9ULC5 683 aa19.11■□□□□ 0.65
SREBF1-220ENST00000581707 DRG1Q9Y295 367 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms