RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ABCG1P45844 678 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 ERVPABLB-1P60509 514 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 GNG11P61952 73 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 GPS1Q13098 491 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 NFE2L1Q14494 772 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 PLCL1Q15111 1095 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 AGAP9Q5VTM2 703 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 CCDC137Q6PK04 289 aaKnown RBP14.98□□□□□ -0.01
SMG6-220ENST00000576218 C19orf48Q6RUI8 117 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 AFTPHQ6ULP2 937 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 C11orf96Q7Z7L8 435 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 RASGEF1CQ8N431 466 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 RCBTB1Q8NDN9 531 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 ZNF248Q8NDW4 579 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 OR4D9Q8NGE8 314 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 GRK7Q8WTQ7 553 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 HNRNPLLQ8WVV9 542 aaKnown RBP14.98□□□□□ -0.01
SMG6-220ENST00000576218 PDLIM2Q96JY6 352 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 EPB41L1Q9H4G0 881 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 CASS4Q9NQ75 786 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 IMP3Q9NV31 184 aaKnown RBP14.98□□□□□ -0.01
SMG6-220ENST00000576218 SMARCAL1Q9NZC9 954 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 BFARQ9NZS9 450 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 SCHIP1Q9P0W5 487 aaPredicted RBP14.98□□□□□ -0.01
SMG6-220ENST00000576218 KLHL3Q9UH77 587 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 ZNF106Q9H2Y7 1883 aaKnown RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 UNC13CQ8NB66 2214 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 ANKRD11Q6UB99 2663 aaPredicted RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 MROH6A6NGR9 719 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 LILRA5A6NI73 299 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 F8W8V4 182 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 H7C0S8 307 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 TLX3O43711 291 aaPredicted RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 KRT37O76014 449 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 DXOO77932 396 aaKnown RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 CAPNS1P04632 268 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 ITGA2BP08514 1039 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 XRCC1P18887 633 aaPredicted RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 PPARGP37231 505 aaPredicted RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 MLLT3P42568 568 aaPredicted RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 ZFP36L1Q07352 338 aaKnown RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 BCL7AQ4VC05 210 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 FASTKD1Q53R41 847 aaKnown RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 TSTD2Q5T7W7 516 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 TMEM164Q5U3C3 297 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 ABRAXAS1Q6UWZ7 409 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 TMEM26Q6ZUK4 368 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 TMPRSS9Q7Z410 1059 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 FAM129CQ86XR2 697 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 SLITRK4Q8IW52 837 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 RBM12BQ8IXT5 1001 aaKnown RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 OR2L2Q8NH16 312 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 SNIP1Q8TAD8 396 aaKnown RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 COG1Q8WTW3 980 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 KCNE4Q8WWG9 221 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 CCDC97Q96F63 343 aaPredicted RBP14.97□□□□□ -0.01
SMG6-220ENST00000576218 SLC46A1Q96NT5 459 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 TBC1D10AQ9BXI6 508 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 SNX12Q9UMY4 172 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 TCAF1Q9Y4C2 921 aa14.97□□□□□ -0.01
SMG6-220ENST00000576218 IGHV5-10-1A0A0J9YXX1 117 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 CCDC162PA2VCL2 907 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 PMS2P1A4D2B8 440 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 OR51F1A6NGY5 319 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 A8MU76 341 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 HGSO14964 777 aaPredicted RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 UBXN7O94888 489 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 POLBP06746 335 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 TCP1P17987 556 aaKnown RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 CSF2RBP32927 897 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 COILP38432 576 aaPredicted RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 EIF2S3P41091 472 aaKnown RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 SLC19A1P41440 591 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 PRLHRP49683 370 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 CDKN1CP49918 316 aaPredicted RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 LIMK2P53671 638 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 UBE2IP63279 158 aaKnown RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 DMPKQ09013 629 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 TRA2AQ13595 282 aaKnown RBP eCLIP14.96□□□□□ -0.01
SMG6-220ENST00000576218 PPP1R7Q15435 360 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 PCID2Q5JVF3 399 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 BROXQ5VW32 411 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 LYPLAL1Q5VWZ2 237 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 CASC4Q6P4E1 433 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 TMEM71Q6P5X7 295 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 WASH2PQ6VEQ5 465 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 PLXDC1Q8IUK5 500 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 CFAP206Q8IYR0 622 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 AGBL5Q8NDL9 886 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 HM13Q8TCT9 377 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 ACTRT1Q8TDG2 376 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 HDAC10Q969S8 669 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 C12orf66Q96MD2 445 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 IL22Q9GZX6 179 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 WWP1Q9H0M0 922 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 WASH6PQ9NQA3 447 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 ZNF624Q9P2J8 865 aaPredicted RBP14.96□□□□□ -0.01
SMG6-220ENST00000576218 ACSL5Q9ULC5 683 aa14.96□□□□□ -0.01
SMG6-220ENST00000576218 WDR37Q9Y2I8 494 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms