RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ACSL6Q9UKU0 697 aa9.53□□□□□ -0.88
NPLOC4-216ENST00000574344 PKP3Q9Y446 797 aa9.53□□□□□ -0.88
NPLOC4-216ENST00000574344 PIEZO2Q9H5I5 2752 aa9.52□□□□□ -0.88
NPLOC4-216ENST00000574344 PIKFYVEQ9Y2I7 2098 aa9.52□□□□□ -0.88
NPLOC4-216ENST00000574344 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 OR5K4A6NMS3 321 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 DDX3YO15523 660 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 VEGFDO43915 354 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 PHF2O75151 1096 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 C1QL1O75973 258 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 STK10O94804 968 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 VIPP01282 170 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 ZNF7P17097 686 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 VCLP18206 1134 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 HLA-DPA1P20036 260 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 SPAM1P38567 509 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 CHRNA4P43681 627 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 DR1Q01658 176 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 MPP3Q13368 585 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 TAZQ16635 292 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 ATP13A5Q4VNC0 1218 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 ITPRIPL1Q6GPH6 555 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 IYDQ6PHW0 289 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 KDELC1Q6UW63 502 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 FAM151BQ6UXP7 276 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 BBS12Q6ZW61 710 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 IL22RA1Q8N6P7 574 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 AENQ8WTP8 325 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 TADA1Q96BN2 335 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 LRRC45Q96CN5 670 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 CXorf40BQ96DE9 158 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 SGF29Q96ES7 293 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 MRGPRX2Q96LB1 330 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 VPS35Q96QK1 796 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 FCRL5Q96RD9 977 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 TIMM29Q9BSF4 260 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 TBC1D10AQ9BXI6 508 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 AP1M1Q9BXS5 423 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 ZCCHC2Q9C0B9 1178 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 TRABDQ9H4I3 376 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 FAM53CQ9NYF3 392 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 CPNE7Q9UBL6 633 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 TRHDEQ9UKU6 1024 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
NPLOC4-216ENST00000574344 GLYATL1P3A0A0U1RQE8 302 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 LOC285095A0A1B0GVY8 99 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 LILRA5A6NI73 299 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 GOLGA6L10A6NI86 522 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 EFSO43281 561 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 RAD51CO43502 376 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 BUD23O43709 281 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 AMD1P17707 334 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 IDSP22304 550 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 RPL10P27635 214 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 RBL1P28749 1068 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 PBLDP30039 288 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 AKT1P31749 480 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 HMGCLP35914 325 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 HALP42357 657 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 EPHA4P54764 986 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 GEMP55040 296 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 RAB15P59190 212 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 COPS2P61201 443 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 SLC7A5Q01650 507 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 OTUD4Q01804 1114 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 XRCC4Q13426 336 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 ITGA9Q13797 1035 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 SLC1A5Q15758 541 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 DCAF12Q5T6F0 453 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 ZDHHC20Q5W0Z9 365 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 WDR74Q6RFH5 385 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 PCSK4Q6UW60 755 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 CDKL3Q8IVW4 592 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 GSPT2Q8IYD1 628 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 TTC30BQ8N4P2 665 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 ACTL9Q8TC94 416 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 GRK7Q8WTQ7 553 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 SNRNP27Q8WVK2 155 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 IFT81Q8WYA0 676 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 TTC9Q92623 222 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 PMEPA1Q969W9 287 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 OXNAD1Q96HP4 312 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 FAM118BQ9BPY3 351 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 FICDQ9BVA6 458 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 OSBPL8Q9BZF1 889 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 FAM129AQ9BZQ8 928 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 GBA3Q9H227 469 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 EPB41L1Q9H4G0 881 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 C10orf88Q9H8K7 445 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 HOMER3Q9NSC5 361 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 OCIAD1Q9NX40 245 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 PCDHA3Q9Y5H8 950 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 B3GALT1Q9Y5Z6 326 aa9.51□□□□□ -0.89
NPLOC4-216ENST00000574344 A6NCN8 305 aa9.5□□□□□ -0.89
NPLOC4-216ENST00000574344 CHUKO15111 745 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms