RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RTP4Q96DX8 246 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 PPP1R2P1Q96PQ5 205 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 BAG1Q99933 345 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 TBL1YQ9BQ87 522 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 LACRTQ9GZZ8 138 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 ASB8Q9H765 288 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 UCK1Q9HA47 277 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 APMAPQ9HDC9 416 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF624Q9P2J8 865 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 PDP2Q9P2J9 529 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 FKBPLQ9UIM3 349 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 CRLS1Q9UJA2 301 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 PACSIN2Q9UNF0 486 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 EFR3BQ9Y2G0 817 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 REXO2Q9Y3B8 237 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 GRID2IPA4D2P6 1211 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 GOLGA6L6A8MZA4 724 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 KCNJ13O60928 360 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 POP7O75817 140 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF189O75820 626 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 CRTAMO95727 393 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 FTCDO95954 541 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ITGB2P05107 769 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 PYGMP11217 842 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 RALBP11234 206 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 LIFP15018 202 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 BRAFP15056 766 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 FECHP22830 423 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ARSDP51689 593 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 CTSCP53634 463 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 PDE1BQ01064 536 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 KIF5AQ12840 1032 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 NFATC3Q12968 1075 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 SEPT6Q14141 434 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 NFE2L1Q14494 772 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 SPARCL1Q14515 664 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 CLCA4Q14CN2 919 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 TAF1AQ15573 450 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 AGAP9Q5VTM2 703 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 CACHD1Q5VU97 1274 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ABRAXAS1Q6UWZ7 409 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 WASH2PQ6VEQ5 465 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 FAM92BQ6ZTR7 304 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 C11orf96Q7Z7L8 435 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 RASGRP3Q8IV61 690 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 NLGN4XQ8N0W4 816 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 BEND7Q8N7W2 519 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 BMPERQ8N8U9 685 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 NLGN4YQ8NFZ3 816 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 GPR150Q8NGU9 434 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF398Q8TD17 642 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ALG3Q92685 438 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 RNF31Q96EP0 1072 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 DCUN1D1Q96GG9 259 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF514Q96K75 400 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 C9orf72Q96LT7 481 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 SPATA13Q96N96 652 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 GORASP1Q9BQQ3 440 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ZPBPQ9BS86 351 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 DESI2Q9BSY9 194 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ULBP3Q9BZM4 244 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 GPN2Q9H9Y4 310 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 SLC40A1Q9NP59 571 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 WASH6PQ9NQA3 447 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 FBXO8Q9NRD0 319 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 IMP3Q9NV31 184 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 OGFRQ9NZT2 677 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 WDR37Q9Y2I8 494 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 HEMK1Q9Y5R4 338 aaPredicted RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 CFAP20Q9Y6A4 193 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 SLC30A1Q9Y6M5 507 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF462Q96JM2 2506 aa9.47□□□□□ -0.89
NPLOC4-212ENST00000573328 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.89
NPLOC4-212ENST00000573328 C5orf60A6NFR6 353 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 ZNF891A8MT65 544 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 MIF4GDA9UHW6 222 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 GAPDHSO14556 408 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 SRP72O76094 671 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 STK17BO94768 372 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 C9P02748 559 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC35G4P0C7Q5 338 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 FAM87AP0C7U9 286 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 PLA2G2AP14555 144 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 WT1P19544 449 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 ITGALP20701 1170 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 HADHAP40939 763 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 LEPRP48357 1165 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 GSE1Q14687 1217 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 CYB5D1Q6P9G0 228 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 KLHL35Q6PF15 583 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 FAM83HQ6ZRV2 1179 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 LRRC57Q8N9N7 239 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 OR13C4Q8NGS5 318 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.9
NPLOC4-212ENST00000573328 NAT14Q8WUY8 206 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms