RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 C4orf22Q6V702 233 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 SLC9B2Q86UD5 537 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 SERPINA9Q86WD7 417 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 WDR36Q8NI36 951 aaKnown RBP13.17□□□□□ -0.3
RPAIN-207ENST00000570883 ZNF514Q96K75 400 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-207ENST00000570883 TMEM74Q96NL1 305 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 SLC38A3Q99624 504 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 COPS8Q99627 209 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 TMEM9Q9P0T7 183 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
RPAIN-207ENST00000570883 SNRNP200O75643 2136 aaKnown RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 IGHV5-10-1A0A0J9YXX1 117 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 HEATR9A2RTY3 570 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 OR5K4A6NMS3 321 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 PHF2O75151 1096 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 KRT37O76014 449 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 HGFP14210 728 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 VCLP18206 1134 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 XRCC1P18887 633 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 TPSB2P20231 275 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 IDSP22304 550 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 ADRA1DP25100 572 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 MSNP26038 577 aaKnown RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 MAGEA6P43360 314 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 PRLHRP49683 370 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 GPLD1P80108 840 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 CACNG1Q06432 222 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 GPS1Q13098 491 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 SQSTM1Q13501 440 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 CLCA4Q14CN2 919 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 C16orf72Q14CZ0 275 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 CLPPQ16740 277 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 SKIDA1Q1XH10 827 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 ZNF658BQ4V348 819 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 ANKRD22Q5VYY1 191 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 CCDC137Q6PK04 289 aaKnown RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 PIM3Q86V86 326 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 GPR150Q8NGU9 434 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 DCUN1D1Q96GG9 259 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 NAP1L3Q99457 506 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 ZDHHC3Q9NYG2 299 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 PSMD13Q9UNM6 376 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
RPAIN-207ENST00000570883 DNMT3AQ9Y6K1 912 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-207ENST00000570883 MGAT4DA6NG13 374 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 LILRA5A6NI73 299 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 AGRPO00253 132 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 PLD2O14939 933 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 KCNJ13O60928 360 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 TMEM63AO94886 807 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 GAS8O95995 478 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
RPAIN-207ENST00000570883 KRT14P02533 472 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 ATP1B2P14415 290 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-207ENST00000570883 TERF1P54274 439 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 SESN2P58004 480 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-207ENST00000570883 GNG11P61952 73 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 PHF19Q5T6S3 580 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 FOXR1Q6PIV2 292 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 TMEM26Q6ZUK4 368 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 RAB11FIP2Q7L804 512 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 TAS2R42Q7RTR8 314 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 CLDN19Q8N6F1 224 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 AVL9Q8NBF6 648 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 OR4D9Q8NGE8 314 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 OR10G6Q8NH81 332 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 HDAC10Q969S8 669 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 LINC00615Q96LM1 132 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-207ENST00000570883 CCDC74BQ96LY2 380 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 SLC46A1Q96NT5 459 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 STRADBQ9C0K7 418 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 STN1Q9H668 368 aaKnown RBP13.15□□□□□ -0.3
RPAIN-207ENST00000570883 UCK1Q9HA47 277 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 CHRAC1Q9NRG0 131 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 POT1Q9NUX5 634 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 OGFRQ9NZT2 677 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 FAM8A1Q9UBU6 413 aa13.15□□□□□ -0.3
RPAIN-207ENST00000570883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPAIN-207ENST00000570883 A0A087WV48 116 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 CDRT15L2A8MXV6 281 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 CFAP99D6REC4 459 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 TMX2-CTNND1H3BSU7 103 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 ZW10O43264 779 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 DUX1O43812 170 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 VIPP01282 170 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 THRAP10827 490 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 RALBP11234 206 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 TCP1P17987 556 aaKnown RBP13.14□□□□□ -0.31
RPAIN-207ENST00000570883 MPSTP25325 297 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 MGAT1P26572 445 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 ETV5P41161 510 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 FNTAP49354 379 aa13.14□□□□□ -0.31
RPAIN-207ENST00000570883 LIMK2P53671 638 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms