RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ULK4Q96C45 1275 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 LINC00615Q96LM1 132 aaPredicted RBP28.85■■■□□ 2.21
RAB40C-211ENST00000568586 BBC3Q96PG8 261 aaPredicted RBP28.85■■■□□ 2.21
RAB40C-211ENST00000568586 OGFRQ9NZT2 677 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 FOXJ2Q9P0K8 574 aa28.85■■■□□ 2.21
RAB40C-211ENST00000568586 MN1Q10571 1320 aaPredicted RBP28.85■■■□□ 2.21
RAB40C-211ENST00000568586 ATRXP46100 2492 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 SGTAO43765 313 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 LIPCP11150 499 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 DRG2P55039 364 aaKnown RBP28.84■■■□□ 2.21
RAB40C-211ENST00000568586 SEPT7Q16181 437 aaKnown RBP28.84■■■□□ 2.21
RAB40C-211ENST00000568586 GPR33Q49SQ1 333 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 FAM83HQ6ZRV2 1179 aaPredicted RBP28.84■■■□□ 2.21
RAB40C-211ENST00000568586 SNX20Q7Z614 316 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 NXPE1Q8N323 547 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 BMPERQ8N8U9 685 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 SGF29Q96ES7 293 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 CPNE5Q9HCH3 593 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 NLE1Q9NVX2 485 aaPredicted RBP28.84■■■□□ 2.21
RAB40C-211ENST00000568586 SLC30A1Q9Y6M5 507 aa28.84■■■□□ 2.21
RAB40C-211ENST00000568586 TRBV5-4A0A0C4DH59 114 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 OR2AG2A6NM03 316 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 OR52A4PA6NMU1 304 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 C9P02748 559 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 ARSDP51689 593 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 VAC14Q08AM6 782 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 SIX1Q15475 284 aaPredicted RBP28.83■■■□□ 2.21
RAB40C-211ENST00000568586 LINC00523Q86TU6 105 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 PLXDC1Q8IUK5 500 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 TRIM48Q8IWZ4 208 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 LSM14AQ8ND56 463 aaKnown RBP28.83■■■□□ 2.21
RAB40C-211ENST00000568586 HEXDCQ8WVB3 486 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 ALS2CR12Q96Q35 445 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 DDA1Q9BW61 102 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 LZTFL1Q9NQ48 299 aa28.83■■■□□ 2.21
RAB40C-211ENST00000568586 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.83■■■□□ 2.21
RAB40C-211ENST00000568586 IGLV3-16A0A075B6K0 115 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 MGAT4DA6NG13 374 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 MROH6A6NGR9 719 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 K7ENP7 123 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 AGRPO00253 132 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 SUN1O94901 812 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 ANKRD34CP0C6C1 535 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 ITGALP20701 1170 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 AKT1P31749 480 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 FNBP1LQ5T0N5 605 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 DRICH1Q6PGQ1 229 aaPredicted RBP28.82■■■□□ 2.2
RAB40C-211ENST00000568586 INO80CQ6PI98 192 aaPredicted RBP28.82■■■□□ 2.2
RAB40C-211ENST00000568586 XKR5Q6UX68 686 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 OR2L2Q8NH16 312 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 DNAJC1Q96KC8 554 aaKnown RBP28.82■■■□□ 2.2
RAB40C-211ENST00000568586 CCNL2Q96S94 520 aaPredicted RBP28.82■■■□□ 2.2
RAB40C-211ENST00000568586 OCIAD1Q9NX40 245 aa28.82■■■□□ 2.2
RAB40C-211ENST00000568586 EFSO43281 561 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 UBXN7O94888 489 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 TPH1P17752 444 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 FDFT1P37268 417 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 HALP42357 657 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 NFE2L1Q14494 772 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 TRIM58Q8NG06 486 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 STYXQ8WUJ0 223 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 C1orf54Q8WWF1 131 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 TLR10Q9BXR5 811 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 CRLS1Q9UJA2 301 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 ACSL5Q9ULC5 683 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 ZNF148Q9UQR1 794 aa28.81■■■□□ 2.2
RAB40C-211ENST00000568586 TOX3O15405 576 aaPredicted RBP28.8■■■□□ 2.2
RAB40C-211ENST00000568586 RAB15P59190 212 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 TMPRSS15P98073 1019 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 GPR18Q14330 331 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 TGIF1Q15583 401 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 RPE65Q16518 533 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 CCNG2Q16589 344 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 ZFAND4Q86XD8 727 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 BEND7Q8N7W2 519 aaPredicted RBP28.8■■■□□ 2.2
RAB40C-211ENST00000568586 CXorf40BQ96DE9 158 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 CDKN2AIPNLQ96HQ2 116 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 COPS8Q99627 209 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 ASPSCR1Q9BZE9 553 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 RAB33BQ9H082 229 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 ETNK1Q9HBU6 452 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 EPHA6Q9UF33 1036 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 ZKSCAN5Q9Y2L8 839 aa28.8■■■□□ 2.2
RAB40C-211ENST00000568586 RALBP11234 206 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 MC4RP32245 332 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 MAPK9P45984 424 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 PRLHRP49683 370 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 MC2RQ01718 297 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 SEMA5AQ13591 1074 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 POU6F1Q14863 301 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 ARHGAP40Q5TG30 622 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 DET1Q7L5Y6 550 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 ART4Q93070 314 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 PMEPA1Q969W9 287 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 DCUN1D1Q96GG9 259 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 ZMYND15Q9H091 742 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 FBXO8Q9NRD0 319 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 ZDHHC3Q9NYG2 299 aa28.79■■■□□ 2.2
RAB40C-211ENST00000568586 DRG1Q9Y295 367 aaKnown RBP28.79■■■□□ 2.2
RAB40C-211ENST00000568586 EFCAB7A8K855 629 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms