RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 JAM2P57087 298 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 IHHQ14623 411 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 CAMK4Q16566 473 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 PTCHD3Q3KNS1 767 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 AGAP9Q5VTM2 703 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 FAM198BQ6UWH4 519 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 WASH2PQ6VEQ5 465 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 MED13LQ71F56 2210 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 SYTL1Q8IYJ3 562 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 GPR150Q8NGU9 434 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 ZNF653Q96CK0 615 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 PCDH9Q9HC56 1237 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 HRASLS2Q9NWW9 162 aa15.81■□□□□ 0.12
CLK3-223ENST00000568488 TACC2O95359 2948 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 MASP2O00187 686 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 PEX12O00623 359 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 CDK14O94921 469 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 ZBTB11O95625 1053 aaPredicted RBP15.8■□□□□ 0.12
CLK3-223ENST00000568488 PRLP01236 227 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 EDN3P14138 238 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 VCLP18206 1134 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 CA4P22748 312 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 RORAP35398 523 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 PTGER4P35408 488 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 ARL4AP40617 200 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 ZNF135P52742 658 aaPredicted RBP15.8■□□□□ 0.12
CLK3-223ENST00000568488 ART3Q13508 389 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 FBXO38Q6PIJ6 1188 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 PARP9Q8IXQ6 854 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 MCOLN2Q8IZK6 566 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 TEX26Q8N6G2 289 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 MLKLQ8NB16 471 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 GRHL3Q8TE85 626 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 CD180Q99467 661 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 TLR10Q9BXR5 811 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 TDRD1Q9BXT4 1180 aaKnown RBP15.8■□□□□ 0.12
CLK3-223ENST00000568488 ACTR5Q9H9F9 607 aaPredicted RBP15.8■□□□□ 0.12
CLK3-223ENST00000568488 FANCEQ9HB96 536 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 LATS2Q9NRM7 1088 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 PCMTD2Q9NV79 361 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 TAB2Q9NYJ8 693 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 PCSK5Q92824 1860 aa15.8■□□□□ 0.12
CLK3-223ENST00000568488 C9J4A7 227 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 E2F3O00716 465 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 COX6B1P14854 86 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 ABRQ12979 859 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 MAMLD1Q13495 774 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 NCF4Q15080 339 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 DCAF10Q5QP82 559 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 ACAD10Q6JQN1 1059 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 ARMC6Q6NXE6 501 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 CYP4V2Q6ZWL3 525 aaPredicted RBP15.79■□□□□ 0.12
CLK3-223ENST00000568488 MRGPREQ86SM8 312 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 PSTKQ8IV42 348 aaKnown RBP15.79■□□□□ 0.12
CLK3-223ENST00000568488 ZNF547Q8IVP9 402 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 GLYATL1Q969I3 302 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 POM121Q96HA1 1249 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 IP6K3Q96PC2 410 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 TRAPPC9Q96Q05 1148 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 LYSMD1Q96S90 227 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 AGPAT1Q99943 283 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 PARVAQ9NVD7 372 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 PSMD13Q9UNM6 376 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 PADI2Q9Y2J8 665 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 CSAG2Q9Y5P2 127 aa15.79■□□□□ 0.12
CLK3-223ENST00000568488 CCDC168Q8NDH2 2452 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 OR5K3A6NET4 321 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 TMCO5BA8MYB1 307 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 EPHB6O15197 1021 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 GADD45BO75293 160 aaPredicted RBP15.78■□□□□ 0.12
CLK3-223ENST00000568488 SLC4A1P02730 911 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 STSP08842 583 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 CYP2A7P20853 494 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 AGXTP21549 392 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 ARCN1P48444 511 aaKnown RBP15.78■□□□□ 0.12
CLK3-223ENST00000568488 CDC16Q13042 620 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 HIF1AQ16665 826 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 QPCTQ16769 361 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 MLIPQ5VWP3 458 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 SPOCD1Q6ZMY3 1216 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 OOSP2Q86WS3 158 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 TRAPPC5Q8IUR0 188 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 NXPE1Q8N323 547 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 GPR26Q8NDV2 337 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 FAR1Q8WVX9 515 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 HSPH1Q92598 858 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 PPM1MQ96MI6 270 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 WDR77Q9BQA1 342 aaPredicted RBP15.78■□□□□ 0.12
CLK3-223ENST00000568488 ZSCAN5AQ9BUG6 496 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 NUP85Q9BW27 656 aa15.78■□□□□ 0.12
CLK3-223ENST00000568488 SAMSN1Q9NSI8 373 aaKnown RBP15.78■□□□□ 0.12
CLK3-223ENST00000568488 NOVA2Q9UNW9 492 aaKnown RBP15.78■□□□□ 0.12
CLK3-223ENST00000568488 KLF2Q9Y5W3 355 aaPredicted RBP15.78■□□□□ 0.12
CLK3-223ENST00000568488 OR6C74A6NCV1 312 aa15.77■□□□□ 0.12
CLK3-223ENST00000568488 ANKRD66B4E2M5 251 aa15.77■□□□□ 0.12
CLK3-223ENST00000568488 TMEM150CB9EJG8 249 aa15.77■□□□□ 0.12
CLK3-223ENST00000568488 ATMINO43313 823 aaPredicted RBP15.77■□□□□ 0.12
CLK3-223ENST00000568488 VEGFDO43915 354 aa15.77■□□□□ 0.12
CLK3-223ENST00000568488 IGHEP01854 428 aa15.77■□□□□ 0.12
CLK3-223ENST00000568488 CES1P23141 567 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms