RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 HK3P52790 923 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 SH3BP2P78314 561 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 NFKB2Q00653 900 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 CLCQ05315 142 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 RBBP7Q16576 425 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 AAK1Q2M2I8 961 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 LSM12Q3MHD2 195 aaKnown RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 TMEM198Q66K66 360 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 RAET1GQ6H3X3 334 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 ADAMTSL2Q86TH1 951 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 PHTF2Q8N3S3 785 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 TMIEQ8NEW7 156 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 CATSPER2Q96P56 530 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 TRMOQ9BU70 441 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 ZSCAN5AQ9BUG6 496 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 FAM126AQ9BYI3 521 aaPredicted RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 THAP10Q9P2Z0 257 aaPredicted RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 EIF2B4Q9UI10 523 aaKnown RBP6.96□□□□□ -1.29
SMG1-215ENST00000568239 TRAF6Q9Y4K3 522 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 STON1Q9Y6Q2 735 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 DOCK9Q9BZ29 2069 aa6.96□□□□□ -1.29
SMG1-215ENST00000568239 PLXNB3Q9ULL4 1909 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 PRR23AA6NEV1 266 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TRPC5OSA6NMA1 111 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 B2RBV5 119 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 RAD51BO15315 384 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 FFAR2O15552 330 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 MAGEC1O60732 1142 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 RECQL5O94762 991 aaPredicted RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 CDK14O94921 469 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 PTPN4P29074 926 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 BMP8BP34820 402 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 NUBP1P53384 320 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 CREB5Q02930 508 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ELP6Q0PNE2 266 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 KRT72Q14CN4 511 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 SKIV2LQ15477 1246 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 C18orf21Q32NC0 220 aaPredicted RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 KHDC1Q4VXA5 237 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 HENMT1Q5T8I9 393 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 MTSS1LQ765P7 747 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ERN2Q76MJ5 926 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 ASRGL1Q7L266 308 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TRIM74Q86UV6 250 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 DDIASQ8IXT1 998 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 KCNV2Q8TDN2 545 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 GANCQ8TET4 914 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ELMO1Q92556 727 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ATP6V1E2Q96A05 226 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 SLC7A6OSQ96CW6 309 aaPredicted RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 KCNA7Q96RP8 456 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 P2RY13Q9BPV8 354 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 HGH1Q9BTY7 390 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 CCDC106Q9BWC9 280 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TBC1D10AQ9BXI6 508 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 SLC24A3Q9HC58 644 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 KCTD5Q9NXV2 234 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ADAMTS6Q9UKP5 1117 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 HCN2Q9UL51 889 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 MTCH2Q9Y6C9 303 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ZNF106Q9H2Y7 1883 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 PABPN1LA6NDY0 278 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 SPECC1L-ADORA2AF8WAN1 911 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 RNASEH1O60930 286 aaKnown RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 PCDH8O95206 1070 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 C6P13671 934 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 PBLDP30039 288 aaPredicted RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 GPR1P46091 355 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 FOXA1P55317 472 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 BTKQ06187 659 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 CNTN1Q12860 1018 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TXNDC11Q6PKC3 985 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 SBSNQ6UWP8 590 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.96□□□□□ -1.3
SMG1-215ENST00000568239 TECPR1Q7Z6L1 1165 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 LONP2Q86WA8 852 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 PELI3Q8N2H9 469 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TRAM1L1Q8N609 369 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 CFAP61Q8NHU2 1237 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 HCAR2Q8TDS4 363 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 CXorf40AQ8TE69 158 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 BTN2A2Q8WVV5 523 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 GLYATL1Q969I3 302 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 MCUR1Q96AQ8 359 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 RASSF4Q9H2L5 321 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ARHGEF3Q9NR81 526 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 RAD18Q9NS91 495 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TAGLN3Q9UI15 199 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 ASB1Q9Y576 335 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TIMM22Q9Y584 194 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TRIOO75962 3097 aa6.96□□□□□ -1.3
SMG1-215ENST00000568239 TICRRQ7Z2Z1 1910 aa6.95□□□□□ -1.3
SMG1-215ENST00000568239 A0A1B0GTL3 188 aa6.95□□□□□ -1.3
SMG1-215ENST00000568239 MEI4A8MW99 385 aa6.95□□□□□ -1.3
SMG1-215ENST00000568239 CAPN14A8MX76 684 aa6.95□□□□□ -1.3
SMG1-215ENST00000568239 K7ESM1 405 aa6.95□□□□□ -1.3
SMG1-215ENST00000568239 MID1O15344 667 aa6.95□□□□□ -1.3
SMG1-215ENST00000568239 CCNT2O60583 730 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms