RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, human

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHCBP1-206	ENST00000567698	FAM98B	Q52LJ0	330 aa	Known RBP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	TMEM35A	Q53FP2	167 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	WBP2NL	Q6ICG8	309 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	OR7E24	Q6IFN5	339 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	GAGE2A	Q6NT46	116 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	TEX38	Q6PEX7	206 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	DENND5B	Q6ZUT9	1274 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	INTS8	Q75QN2	995 aa	Known RBP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	HAUS6	Q7Z4H7	955 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	PRPF39	Q86UA1	669 aa	Known RBP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	CEP57	Q86XR8	500 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	C1orf52	Q8N6N3	182 aa	Known RBP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	JAKMIP2	Q96AA8	810 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	PHF21A	Q96BD5	680 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	SLX1A	Q9BQ83	275 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	SPATC1L	Q9H0A9	340 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	SEMA6A	Q9H2E6	1030 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	LRMDA	Q9H2I8	198 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	KCNK15	Q9H427	330 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	OSGEPL1	Q9H4B0	414 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	TCP11L1	Q9NUJ3	509 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	PSD3	Q9NYI0	1048 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	TAS2R14	Q9NYV8	317 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	MRPL15	Q9P015	296 aa	Known RBP	4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	GAGE2D	Q9UEU5	116 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	HACL1	Q9UJ83	578 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	KCNG2	Q9UJ96	466 aa		4.59	□□□□□ -1.67
SHCBP1-206	ENST00000567698	HEPACAM2	A8MVW5	462 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MAGEB17	A8MXT2	336 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ITGB6	P18564	788 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	DGKA	P23743	735 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	GNL1	P36915	607 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	STAT2	P52630	851 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	DLX5	P56178	289 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	RRP1	P56182	461 aa	Known RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	SIRPA	P78324	504 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	PLIN5	Q00G26	463 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MELK	Q14680	651 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	KCTD2	Q14681	263 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	FAM76B	Q5HYJ3	339 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ZDHHC20	Q5W0Z9	365 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	FAM171B	Q6P995	826 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	SLC9B2	Q86UD5	537 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MUC20	Q8N307	709 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	TMTC2	Q8N394	836 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	GUF1	Q8N442	669 aa	Known RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	SECTM1	Q8WVN6	248 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MOAP1	Q96BY2	351 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ERLEC1	Q96DZ1	483 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ZNF582	Q96NG8	517 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	GCNA	Q96QF7	691 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	CDRT15	Q96T59	188 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	NEURL2	Q9BR09	285 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	C16orf70	Q9BSU1	422 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	NKIRAS2	Q9NYR9	191 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	RABGAP1	Q9Y3P9	1069 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698	NOTCH4	Q99466	2003 aa		4.58	□□□□□ -1.68
SHCBP1-206	ENST00000567698		A0A1W2PS18	150 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ZBTB43	O43298	467 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	AHR	P35869	848 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MMP15	P51511	669 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ARL16	Q0P5N6	197 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	IGSF11	Q5DX21	431 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	BMP2KL	Q5H9B9	411 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ALS2CL	Q60I27	953 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	C18orf65	Q6ZTR6	163 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	C9orf139	Q6ZV77	190 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	DNAAF5	Q86Y56	855 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	DCP1B	Q8IZD4	617 aa	Known RBP	4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	GBGT1	Q8N5D6	347 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	WDR20	Q8TBZ3	569 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	LINGO1	Q96FE5	620 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	SLF1	Q9BQI6	1058 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MRPL1	Q9BYD6	325 aa	Known RBP	4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	KLHL4	Q9C0H6	718 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	DONSON	Q9NYP3	566 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	GDE1	Q9NZC3	331 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	RHCG	Q9UBD6	479 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MORF4L1	Q9UBU8	362 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698	FAM169A	Q9Y6X4	670 aa		4.57	□□□□□ -1.68
SHCBP1-206	ENST00000567698		A0A0G2JNG1	304 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ANKRD66	B4E2M5	251 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	DVL1	O14640	695 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	P4HA2	O15460	535 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	FIBP	O43427	364 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	OR10H2	O60403	315 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ZWINT	O95229	277 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	SAT1	P21673	171 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	MARK3	P27448	753 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	GAS1	P54826	345 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	EEF1A1	P68104	462 aa	Known RBP	4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	PITX1	P78337	314 aa	Predicted RBP	4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	KIR2DS5	Q14953	304 aa		4.56	□□□□□ -1.68
SHCBP1-206	ENST00000567698	ZRSR1	Q15695	479 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms