RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 DTNBP1Q96EV8 351 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 PDLIM5Q96HC4 596 aaKnown RBP17.53■□□□□ 0.4
CMTM3-214ENST00000567572 ZNF382Q96SR6 550 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 SLC46A2Q9BY10 475 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 RBM38Q9H0Z9 239 aaKnown RBP17.53■□□□□ 0.4
CMTM3-214ENST00000567572 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 LHX3Q9UBR4 397 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 VPS51Q9UID3 782 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 FAM50BQ9Y247 325 aa17.53■□□□□ 0.4
CMTM3-214ENST00000567572 LINC01553A4QN01 128 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 BTN3A1O00481 513 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 CSPG5O95196 566 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 TSPAN12O95859 305 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 GRIA3P42263 894 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 PTGER3P43115 390 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 ERVK-8P63133 956 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 TUBA4AP68366 448 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 VPS26BQ4G0F5 336 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 HMBOX1Q6NT76 420 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 CYP2R1Q6VVX0 501 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 C7orf61Q8IZ16 206 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 HM13Q8TCT9 377 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 PRPF18Q99633 342 aaKnown RBP17.52■□□□□ 0.4
CMTM3-214ENST00000567572 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 NUDT4Q9NZJ9 180 aa17.52■□□□□ 0.4
CMTM3-214ENST00000567572 LEF1Q9UJU2 399 aaPredicted RBP17.52■□□□□ 0.4
CMTM3-214ENST00000567572 C7orf72A4D263 438 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 LEFTY2O00292 366 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 PPP6CO00743 305 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 UMPSP11172 480 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 EEFSECP57772 596 aaKnown RBP17.51■□□□□ 0.39
CMTM3-214ENST00000567572 SLC5A9Q2M3M2 681 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 NADK2Q4G0N4 442 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 AASDHQ4L235 1098 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-214ENST00000567572 AP1ARQ63HQ0 302 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 ZBTB49Q6ZSB9 765 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 RTL10Q7L3V2 364 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 CAMK1DQ8IU85 385 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 LPCAT1Q8NF37 534 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 CANT1Q8WVQ1 401 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 PPWD1Q96BP3 646 aaKnown RBP17.51■□□□□ 0.39
CMTM3-214ENST00000567572 APPL1Q9UKG1 709 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 PCDHB1Q9Y5F3 818 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 PCDHA9Q9Y5H5 950 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 RAI2Q9Y5P3 530 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 GBF1Q92538 1859 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 LRRC14BA6NHZ5 514 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 ZNF839A8K0R7 811 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 ANKRD66B4E2M5 251 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 C5orf67F2Z3F1 127 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 SNX2O60749 519 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 H6PDO95479 791 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 LINC00032P0C843 101 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 MC4RP32245 332 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 UBE3AQ05086 875 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 MPPE1Q53F39 396 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 TBCELQ5QJ74 424 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 B3GNT6Q6ZMB0 384 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 TTC16Q8NEE8 873 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 CD200R1Q8TD46 325 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 BHMTQ93088 406 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 KCNA7Q96RP8 456 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 SLC39A3Q9BRY0 314 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 C17orf80Q9BSJ5 609 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 SEMA4BQ9NPR2 832 aaPredicted RBP17.51■□□□□ 0.39
CMTM3-214ENST00000567572 AGPAT4Q9NRZ5 378 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 CMTM6Q9NX76 183 aa17.51■□□□□ 0.39
CMTM3-214ENST00000567572 TNPO3Q9Y5L0 923 aaKnown RBP17.51■□□□□ 0.39
CMTM3-214ENST00000567572 NPEPPSL1A6NEC2 478 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 CDC7O00311 574 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 IFRD1O00458 451 aaPredicted RBP17.5■□□□□ 0.39
CMTM3-214ENST00000567572 STX7O15400 261 aaKnown RBP17.5■□□□□ 0.39
CMTM3-214ENST00000567572 HTRA2O43464 458 aaPredicted RBP17.5■□□□□ 0.39
CMTM3-214ENST00000567572 AKAP10O43572 662 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 ZNF23P17027 643 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 FASP25445 335 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 FXNQ16595 210 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 NRF1Q16656 503 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 NCEH1Q6PIU2 408 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 CERS6Q6ZMG9 384 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 GPRIN3Q6ZVF9 776 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 SYVN1Q86TM6 617 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 GPSM1Q86YR5 675 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 SPNS2Q8IVW8 549 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 TTC30BQ8N4P2 665 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 SNX31Q8N9S9 440 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 HGH1Q9BTY7 390 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 C9orf16Q9BUW7 83 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 SEMA6AQ9H2E6 1030 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 NOL11Q9H8H0 719 aaKnown RBP17.5■□□□□ 0.39
CMTM3-214ENST00000567572 SUN2Q9UH99 717 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 PTBP2Q9UKA9 531 aaKnown RBP17.5■□□□□ 0.39
CMTM3-214ENST00000567572 MYRFQ9Y2G1 1151 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 PTGDR2Q9Y5Y4 395 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 CHD7Q9P2D1 2997 aa17.5■□□□□ 0.39
CMTM3-214ENST00000567572 FAM234BA2RU67 622 aa17.49■□□□□ 0.39
CMTM3-214ENST00000567572 VILLO15195 856 aa17.49■□□□□ 0.39
CMTM3-214ENST00000567572 RFPL2O75678 378 aa17.49■□□□□ 0.39
CMTM3-214ENST00000567572 FGF19O95750 216 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms