RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 CSRP3P50461 194 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 DCDC1P59894 354 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 UBE2IP63279 158 aaKnown RBP18.62■□□□□ 0.57
SPSB3-207ENST00000565550 PLA2G4EQ3MJ16 856 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 CRTC3Q6UUV7 619 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 TIPARPQ7Z3E1 657 aaKnown RBP18.62■□□□□ 0.57
SPSB3-207ENST00000565550 UNC5BQ8IZJ1 945 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 COG1Q8WTW3 980 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 GLYATL1Q969I3 302 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 ZPBPQ9BS86 351 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 EPB41L1Q9H4G0 881 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 GPN2Q9H9Y4 310 aaPredicted RBP18.62■□□□□ 0.57
SPSB3-207ENST00000565550 RAD18Q9NS91 495 aa18.62■□□□□ 0.57
SPSB3-207ENST00000565550 LOC101059948A0A1B0GTJ6 334 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 C5orf60A6NFR6 353 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 LILRA5A6NI73 299 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 ZNF891A8MT65 544 aaPredicted RBP18.61■□□□□ 0.57
SPSB3-207ENST00000565550 GPR89AB7ZAQ6 455 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 TERTO14746 1132 aaKnown RBP18.61■□□□□ 0.57
SPSB3-207ENST00000565550 CHUKO15111 745 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 ZNF185O15231 689 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 FANCGO15287 622 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 NKX2-8O15522 239 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 KIF5CO60282 957 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 GPR89BP0CG08 455 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 BPIP17213 487 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 XRCC1P18887 633 aaPredicted RBP18.61■□□□□ 0.57
SPSB3-207ENST00000565550 KCNJ1P48048 391 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 MPP3Q13368 585 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 LONRF2Q1L5Z9 754 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 INSCQ1MX18 579 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 PDPK2PQ6A1A2 396 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 ITPRIPL1Q6GPH6 555 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 PLXDC1Q8IUK5 500 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 AVL9Q8NBF6 648 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 SLC45A3Q96JT2 553 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 ADNPQ9H2P0 1102 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 OGFRQ9NZT2 677 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 ZNF624Q9P2J8 865 aaPredicted RBP18.61■□□□□ 0.57
SPSB3-207ENST00000565550 NFKBIL1Q9UBC1 381 aaPredicted RBP18.61■□□□□ 0.57
SPSB3-207ENST00000565550 DNAJC16Q9Y2G8 782 aa18.61■□□□□ 0.57
SPSB3-207ENST00000565550 BOD1L1Q8NFC6 3051 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 POLR1CO15160 346 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-207ENST00000565550 CAPN5O15484 640 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-207ENST00000565550 MTX2O75431 263 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 STK17BO94768 372 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 STK10O94804 968 aaKnown RBP18.6■□□□□ 0.57
SPSB3-207ENST00000565550 VIPP01282 170 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 ZSCAN5DPP0CG00 497 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 ZNF7P17097 686 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-207ENST00000565550 TYRP1P17643 537 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 SLC19A1P41440 591 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 GEMP55040 296 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 GFERP55789 205 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 POLE2P56282 527 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 SLC1A5Q15758 541 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 CCDC70Q6NSX1 233 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 ARHGEF18Q6ZSZ5 1173 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 TMEM26Q6ZUK4 368 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 MICALCLQ6ZW33 695 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 LRRTM4Q86VH4 590 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 UBE2Q2Q8WVN8 375 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 KIAA1143Q96AT1 154 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-207ENST00000565550 C9orf72Q96LT7 481 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 OSBPL9Q96SU4 736 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 FERMT1Q9BQL6 677 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 UCK1Q9HA47 277 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 ZNF148Q9UQR1 794 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 TMEM184BQ9Y519 407 aaPredicted RBP18.6■□□□□ 0.57
SPSB3-207ENST00000565550 SLC30A1Q9Y6M5 507 aa18.6■□□□□ 0.57
SPSB3-207ENST00000565550 SPTA1P02549 2419 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 MN1Q10571 1320 aaPredicted RBP18.59■□□□□ 0.57
SPSB3-207ENST00000565550 PDZK1P1A8MUH7 402 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 KMOO15229 486 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 BUD23O43709 281 aaKnown RBP18.59■□□□□ 0.57
SPSB3-207ENST00000565550 CDK14O94921 469 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 IFNB1P01574 187 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 C9P02748 559 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 ADRA1AP35348 466 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 CCR10P46092 362 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 KCNAB2Q13303 367 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 SEPT7Q16181 437 aaKnown RBP18.59■□□□□ 0.57
SPSB3-207ENST00000565550 KHDC1Q4VXA5 237 aaKnown RBP18.59■□□□□ 0.57
SPSB3-207ENST00000565550 PTRH1Q86Y79 214 aaKnown RBP18.59■□□□□ 0.57
SPSB3-207ENST00000565550 ZNF547Q8IVP9 402 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 TRIM48Q8IWZ4 208 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 RASGEF1CQ8N431 466 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 PRELID2Q8N945 189 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 CATSPER2Q96P56 530 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 FSD1LQ9BXM9 530 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 AP1M1Q9BXS5 423 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 BPIFA1Q9NP55 256 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 TMPRSS11EQ9UL52 423 aa18.59■□□□□ 0.57
SPSB3-207ENST00000565550 MYO18BQ8IUG5 2567 aa18.58■□□□□ 0.57
SPSB3-207ENST00000565550 VEGFDO43915 354 aa18.58■□□□□ 0.56
SPSB3-207ENST00000565550 ANXA9O76027 345 aa18.58■□□□□ 0.56
SPSB3-207ENST00000565550 UBXN7O94888 489 aa18.58■□□□□ 0.56
SPSB3-207ENST00000565550 ANKRD34CP0C6C1 535 aa18.58■□□□□ 0.56
SPSB3-207ENST00000565550 PRKAR1AP10644 381 aa18.58■□□□□ 0.56
SPSB3-207ENST00000565550 AMD1P17707 334 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms