RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PRR19A6NJB7 356 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 AGAP14A8MT82 685 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 CFAP99D6REC4 459 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 H7C0S8 307 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 HGSO14964 777 aaPredicted RBP18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 ZSCAN12O43309 604 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 ZSCAN5DPP0CG00 497 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 MPSTP25325 297 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 CSF2RBP32927 897 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 SLC19A1P41440 591 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 MAPK10P53779 464 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 UBE2IP63279 158 aaKnown RBP18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 CFHR1Q03591 330 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 DMPKQ09013 629 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 SEMA5AQ13591 1074 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 C16orf72Q14CZ0 275 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 SKIDA1Q1XH10 827 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 WDR74Q6RFH5 385 aaPredicted RBP18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 TAS2R42Q7RTR8 314 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 CLEC14AQ86T13 490 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 NXPE1Q8N323 547 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 RCBTB1Q8NDN9 531 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 CDKN2AIPNLQ96HQ2 116 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 COPS8Q99627 209 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 EPB41L1Q9H4G0 881 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 UCK1Q9HA47 277 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 POT1Q9NUX5 634 aa18.02■□□□□ 0.48
SYNGR3-204ENST00000564642 CCDC78A2IDD5 438 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 KLHL33A6NCF5 533 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 OR52A4PA6NMU1 304 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 SUN1O94901 812 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 APRTP07741 180 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 ATP1B2P14415 290 aaPredicted RBP18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 BRAFP15056 766 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 ITIH1P19827 911 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 SLC5A2P31639 672 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 CSTF2P33240 577 aaKnown RBP eCLIP18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 RPL22P35268 128 aaKnown RBP18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 NFE2L1Q14494 772 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 CLCA4Q14CN2 919 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 BROXQ5VW32 411 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 TMEM26Q6ZUK4 368 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 SPACA3Q8IXA5 215 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 BEND7Q8N7W2 519 aaPredicted RBP18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 GLIS1Q8NBF1 620 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 TBC1D10AQ9BXI6 508 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 DPH1Q9BZG8 443 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 TMEM9Q9P0T7 183 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 WDR37Q9Y2I8 494 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 PCDHGA7Q9Y5G6 932 aa18.01■□□□□ 0.47
SYNGR3-204ENST00000564642 HEATR9A2RTY3 570 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 MGAT4DA6NG13 374 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 MROH6A6NGR9 719 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 LILRA5A6NI73 299 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 KLK10O43240 276 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 THRAP10827 490 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 AMD1P17707 334 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
SYNGR3-204ENST00000564642 KCNJ1P48048 391 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 BASP1P80723 227 aaKnown RBP18■□□□□ 0.47
SYNGR3-204ENST00000564642 CACNG1Q06432 222 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 BCL7AQ4VC05 210 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 CCDC38Q502W7 563 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 SNAP47Q5SQN1 464 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 TMEM164Q5U3C3 297 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 METRNLQ641Q3 311 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 REXO1L1PQ8IX06 675 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 RBM12BQ8IXT5 1001 aaKnown RBP18■□□□□ 0.47
SYNGR3-204ENST00000564642 AGBL5Q8NDL9 886 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 OR2L2Q8NH16 312 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 USP7Q93009 1102 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 PBKQ96KB5 322 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 SLC40A1Q9NP59 571 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 ZDHHC3Q9NYG2 299 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 PSMD13Q9UNM6 376 aa18■□□□□ 0.47
SYNGR3-204ENST00000564642 A8MU76 341 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 NVLO15381 856 aaKnown RBP17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 UBXN7O94888 489 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 ADRA1DP25100 572 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 ACRV1P26436 265 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 ETV5P41161 510 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 GRIA1P42261 906 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 CDKN1CP49918 316 aaPredicted RBP17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 FAM83HQ6ZRV2 1179 aaPredicted RBP17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 SERPINA9Q86WD7 417 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 PLXDC1Q8IUK5 500 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 NAT14Q8WUY8 206 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 LINC00615Q96LM1 132 aaPredicted RBP17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 CASS4Q9NQ75 786 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 PDP2Q9P2J9 529 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 FAM8A1Q9UBU6 413 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 ACSL5Q9ULC5 683 aa17.99■□□□□ 0.47
SYNGR3-204ENST00000564642 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 CCL4P13236 92 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 TYRP1P17643 537 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 TLE3Q04726 772 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 RPE65Q16518 533 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 PDZD3Q86UT5 571 aa17.98■□□□□ 0.47
SYNGR3-204ENST00000564642 CFAP206Q8IYR0 622 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms