RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CXorf40BQ96DE9 158 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 HEMGNQ9BXL5 484 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 FAM117AQ9C073 453 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 SLC25A18Q9H1K4 315 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 GPN2Q9H9Y4 310 aaPredicted RBP16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A7Q9HAW7 530 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A10Q9HAW8 530 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 UGT1A8Q9HAW9 530 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 TFR2Q9UP52 801 aa16.89■□□□□ 0.29
VPS9D1-203ENST00000563798 AGAP14A8MT82 685 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 SUV39H1O43463 412 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 STAT5AP42229 794 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 HALP42357 657 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 LEPRP48357 1165 aaKnown RBP16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 MSLNQ13421 630 aaPredicted RBP16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 METRNLQ641Q3 311 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 ITPRIPL1Q6GPH6 555 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 KLHDC8BQ8IXV7 354 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 ZNF398Q8TD17 642 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 ZDHHC12Q96GR4 267 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 TGM7Q96PF1 710 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 FSD1LQ9BXM9 530 aa16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 EPN1Q9Y6I3 576 aaPredicted RBP16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 FLNBO75369 2602 aaKnown RBP16.88■□□□□ 0.29
VPS9D1-203ENST00000563798 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 C5orf60A6NFR6 353 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 H7C0C1 242 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 STX7O15400 261 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 PJA2O43164 708 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 GPR39O43194 453 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 NDUFA10O95299 355 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 WISP1O95388 367 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 AGTP01019 485 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 FGF5P12034 268 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 LPOP22079 712 aaPredicted RBP16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 CTNNA2P26232 953 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 ATP5OP48047 213 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 MC1RQ01726 317 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 TAF1AQ15573 450 aaPredicted RBP16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 RPE65Q16518 533 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 TMEM220Q6QAJ8 160 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 FAM83HQ6ZRV2 1179 aaPredicted RBP16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 ACTL9Q8TC94 416 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 ZFPM2Q8WW38 1151 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 FERMT1Q9BQL6 677 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 OSBPL8Q9BZF1 889 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 IL17BQ9UHF5 180 aa16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 AAR2Q9Y312 384 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-203ENST00000563798 SPTA1P02549 2419 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 CCDC66A2RUB6 948 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 C2orf81A6NN90 581 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 F5H423 210 aaPredicted RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 TERTO14746 1132 aaKnown RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 NKX2-8O15522 239 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 BUD23O43709 281 aaKnown RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 KIF1CO43896 1103 aaKnown RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ZNF189O75820 626 aaPredicted RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 NELFEP18615 380 aaKnown RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 CCR10P46092 362 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 POLE2P56282 527 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 OTUD4Q01804 1114 aaKnown RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 FOXM1Q08050 763 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 LONRF2Q1L5Z9 754 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ANKRD20A2Q5SQ80 823 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ANKRD20A1Q5TYW2 823 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ANKRD20A3Q5VUR7 823 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 KLHL35Q6PF15 583 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ATG14Q6ZNE5 492 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 TMTC1Q8IUR5 882 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 CDKL3Q8IVW4 592 aaPredicted RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 UBXN4Q92575 508 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 SLC41A2Q96JW4 573 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 LINC00615Q96LM1 132 aaPredicted RBP16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 PPP1R2P1Q96PQ5 205 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 FICDQ9BVA6 458 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ARNT2Q9HBZ2 717 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 TRIM10Q9UDY6 481 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ARL5AQ9Y689 179 aa16.86■□□□□ 0.29
VPS9D1-203ENST00000563798 ZNF106Q9H2Y7 1883 aaKnown RBP16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 MGAT4DA6NG13 374 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 OR2AG2A6NM03 316 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 SRP72O76094 671 aaKnown RBP16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 PRAMEF1O95521 474 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 RBP3P10745 1247 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 PYGMP11217 842 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 ZNF28P17035 718 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 SEPHS1P49903 392 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 CSRP3P50461 194 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 RWDD2BP57060 319 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 SH3BP2P78314 561 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 XIAPP98170 497 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 PDE1BQ01064 536 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 CDC20Q12834 499 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 KCNAB2Q13303 367 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 NFE2L1Q14494 772 aa16.85■□□□□ 0.29
VPS9D1-203ENST00000563798 PTPRCAPQ14761 206 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms