RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 UBE2IP63279 158 aaKnown RBP15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 CDH17Q12864 832 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 SQSTM1Q13501 440 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 CLPPQ16740 277 aaPredicted RBP15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 TMEM71Q6P5X7 295 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 ABRAXAS1Q6UWZ7 409 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 REXO1L1PQ8IX06 675 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 SPACA3Q8IXA5 215 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 NXPE1Q8N323 547 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 OR4D9Q8NGE8 314 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 STYXQ8WUJ0 223 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 USP7Q93009 1102 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 ULK4Q96C45 1275 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 CDKN2AIPNLQ96HQ2 116 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 MS4A14Q96JA4 679 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 COPS8Q99627 209 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 JRKLQ9Y4A0 524 aa15.31■□□□□ 0.04
AC009088.3-201ENST00000563605 OR51F1A6NGY5 319 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 PRR19A6NJB7 356 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 CDRT15L2A8MXV6 281 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 KCNJ13O60928 360 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 DSPP15924 2871 aaKnown RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 AMD1P17707 334 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 CSTF2P33240 577 aaKnown RBP eCLIP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 ARSDP51689 593 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 SEMA5AQ13591 1074 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 TRIP13Q15645 432 aaPredicted RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 SKIDA1Q1XH10 827 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 AGAP9Q5VTM2 703 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 IGF2-ASQ6U949 168 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 PDZD3Q86UT5 571 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 SERPINA9Q86WD7 417 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 CFAP206Q8IYR0 622 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 PRELID2Q8N945 189 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 AVL9Q8NBF6 648 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 JPH3Q8WXH2 748 aaPredicted RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 TMEM159Q96B96 161 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 ZNF514Q96K75 400 aaPredicted RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 AP1M1Q9BXS5 423 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 ZDHHC3Q9NYG2 299 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 SCN8AQ9UQD0 1980 aa15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 CFAP20Q9Y6A4 193 aaKnown RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 DNMT3AQ9Y6K1 912 aaPredicted RBP15.3■□□□□ 0.04
AC009088.3-201ENST00000563605 MGAT4DA6NG13 374 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 CFAP99D6REC4 459 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 PRAMEF10O60809 474 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 SUN1O94901 812 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 ATP1B2P14415 290 aaPredicted RBP15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 SESN2P58004 480 aaPredicted RBP15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 TLE3Q04726 772 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 GPR18Q14330 331 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 RPE65Q16518 533 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 GPR33Q49SQ1 333 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 DRICH1Q6PGQ1 229 aaPredicted RBP15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 WASH2PQ6VEQ5 465 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 CLEC14AQ86T13 490 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 FAM129CQ86XR2 697 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 PIANPQ8IYJ0 282 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 SLC35F6Q8N357 371 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 DPYSL5Q9BPU6 564 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 WWP1Q9H0M0 922 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 SLC40A1Q9NP59 571 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 WASH6PQ9NQA3 447 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 IMP3Q9NV31 184 aaKnown RBP15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 OCIAD1Q9NX40 245 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 SMARCAL1Q9NZC9 954 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 SLC2A6Q9UGQ3 507 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 ZKSCAN5Q9Y2L8 839 aa15.29■□□□□ 0.04
AC009088.3-201ENST00000563605 CELSR3Q9NYQ7 3312 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 ZFC3H1O60293 1989 aaKnown RBP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 HEATR9A2RTY3 570 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 CCDC162PA2VCL2 907 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 MROH6A6NGR9 719 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 EFCAB7A8K855 629 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 AGAP14A8MT82 685 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 HGSO14964 777 aaPredicted RBP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 SGTAO43765 313 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 UBXN7O94888 489 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 THRAP10827 490 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 FGF3P11487 239 aaPredicted RBP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 ADRA1DP25100 572 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 MLLT3P42568 568 aaPredicted RBP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 VPS41P49754 854 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 EPHA4P54764 986 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 CXADRP78310 365 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 CACNG1Q06432 222 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 DMPKQ09013 629 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 TRA2AQ13595 282 aaKnown RBP eCLIP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 TGIF1Q15583 401 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 BROXQ5VW32 411 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 METRNLQ641Q3 311 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 WDR74Q6RFH5 385 aaPredicted RBP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 ZFAND4Q86XD8 727 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 LILRA3Q8N6C8 439 aaPredicted RBP15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 CLDN19Q8N6F1 224 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 AGBL5Q8NDL9 886 aa15.28■□□□□ 0.04
AC009088.3-201ENST00000563605 SPDYE1Q8NFV5 336 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms