RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ITGB6P18564 788 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 CD72P21854 359 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 TARSP26639 723 aaKnown RBP14.07□□□□□ -0.16
COMMD4-205ENST00000562310 AOAHP28039 575 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 SLC1A6P48664 564 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 ABCE1P61221 599 aaKnown RBP14.07□□□□□ -0.16
COMMD4-205ENST00000562310 TMEM115Q12893 351 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-205ENST00000562310 RCN2Q14257 317 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 GBX1Q14549 363 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 OR4D1Q15615 310 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 KHDC1Q4VXA5 237 aaKnown RBP14.07□□□□□ -0.16
COMMD4-205ENST00000562310 SEL1L3Q68CR1 1132 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 PNCKQ6P2M8 343 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 ZCCHC23Q6ZST2 131 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 DET1Q7L5Y6 550 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 SPATS2Q86XZ4 545 aaKnown RBP14.07□□□□□ -0.16
COMMD4-205ENST00000562310 KIRREL3Q8IZU9 778 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 RASGEF1AQ8N9B8 481 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 CCDC197Q8NCU1 140 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 COX14Q96I36 57 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 ELAC2Q9BQ52 826 aaKnown RBP14.07□□□□□ -0.16
COMMD4-205ENST00000562310 SIKE1Q9BRV8 207 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 TRIM55Q9BYV6 548 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 SLC6A17Q9H1V8 727 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 SGK2Q9HBY8 427 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 TRIM39Q9HCM9 518 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 NUDT4Q9NZJ9 180 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 NCKIPSDQ9NZQ3 722 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 KLHL14Q9P2G3 628 aa14.07□□□□□ -0.16
COMMD4-205ENST00000562310 A0A1W2PQU0 124 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 KANSL1LA0AUZ9 987 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 LRRC72A6NJI9 287 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 SUPT3HB4E1H0 165 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 K7ESM1 405 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 SGTAO43765 313 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 NUAK1O60285 661 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 MTX2O75431 263 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 SUPT3HO75486 399 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 HSPA4LO95757 839 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 IGLV3-19P01714 112 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 PCCBP05166 539 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 MPC1LP0DKB6 136 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 CCR7P32248 378 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 MAPK9P45984 424 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 CCR3P51677 355 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 HK2P52789 917 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 IRF4Q15306 451 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 TSNQ15631 228 aaKnown RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 WSCD2Q2TBF2 565 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 CFAP157Q5JU67 520 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 Q6ZS52 159 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 FRA10AC1Q70Z53 315 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 GPSM1Q86YR5 675 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 TP53I13Q8NBR0 393 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 DENND6BQ8NEG7 585 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 OR2T34Q8NGX1 318 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 ASZ1Q8WWH4 475 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 FUBP1Q96AE4 644 aaKnown RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 L3HYPDHQ96EM0 354 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 SEC16BQ96JE7 1060 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 CCM2Q9BSQ5 444 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 TRMOQ9BU70 441 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 GATA5Q9BWX5 397 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 FAM126AQ9BYI3 521 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 DRC3Q9H069 523 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 LMAN1LQ9HAT1 526 aa14.06□□□□□ -0.16
COMMD4-205ENST00000562310 PHPT1Q9NRX4 125 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 USP36Q9P275 1121 aaKnown RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 ZFR2Q9UPR6 939 aaKnown RBP14.06□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3DA0A087WVF3 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3IA0A087WXS9 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3EA0A087X179 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3KA0A087X1G2 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 KLHL33A6NCF5 533 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3FA6NER0 549 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3LB9A6J9 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 STX16-NPEPL1H3BU86 382 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 CDC7O00311 574 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 STX16O14662 325 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 RAD51BO15315 384 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 CDK14O94921 469 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 S100BP04271 92 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3HP0C7X1 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 GFAPP14136 432 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TPMTP51580 245 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 CDK3Q00526 305 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 SP140Q13342 867 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 BOP1Q14137 746 aaKnown RBP14.05□□□□□ -0.16
COMMD4-205ENST00000562310 UBXN2BQ14CS0 331 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 SYTL3Q4VX76 610 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3GQ6DHY5 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TBC1D3CQ6IPX1 549 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 CGB2Q6NT52 195 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 ADGRG6Q86SQ4 1221 aa14.05□□□□□ -0.16
COMMD4-205ENST00000562310 HEATR4Q86WZ0 1026 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms