RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 SUPT7LO94864 414 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 UNC5CO95185 931 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 SOD1P00441 154 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 RPS17P08708 135 aaKnown RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 MPC1LP0DKB6 136 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 C6P13671 934 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 GFAPP14136 432 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ITGB6P18564 788 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 MSH3P20585 1137 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 DRD1P21728 446 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 TIE1P35590 1138 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 COPAP53621 1224 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 TAS2R38P59533 333 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 NCALDP61601 193 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 RPS14P62263 151 aaKnown RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 ZBTB16Q05516 673 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 PCBP2Q15366 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDH13-205ENST00000562307 TGFBIQ15582 683 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 TBCCQ15814 346 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 KHDC1Q4VXA5 237 aaKnown RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 AGBL4Q5VU57 503 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ANKS6Q68DC2 871 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ZNF776Q68DI1 518 aaPredicted RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 METTL2BQ6P1Q9 378 aaKnown RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 NEK10Q6ZWH5 1172 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ASRGL1Q7L266 308 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 CUZD1Q86UP6 607 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ALYREFQ86V81 257 aaKnown RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 AADATQ8N5Z0 425 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 PDPRQ8NCN5 879 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 OR2T3Q8NH03 318 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 MAPK15Q8TD08 544 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ZNF483Q8TF39 744 aaPredicted RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 NUS1Q96E22 293 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 RILPQ96NA2 401 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 GAS2L1Q99501 681 aaPredicted RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 CCDC106Q9BWC9 280 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 FAM126AQ9BYI3 521 aaPredicted RBP9.38□□□□□ -0.91
CDH13-205ENST00000562307 NMUR2Q9GZQ4 415 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 KCNK12Q9HB15 430 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 CD248Q9HCU0 757 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 ZDHHC4Q9NPG8 344 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 TXLNGQ9NUQ3 528 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 OARD1Q9Y530 152 aa9.38□□□□□ -0.91
CDH13-205ENST00000562307 COL4A2P08572 1712 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 PLXNB3Q9ULL4 1909 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 TRPC5OSA6NMA1 111 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 RAD51BO15315 384 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 MID1O15344 667 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SLC16A5O15375 505 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 SYNCRIPO60506 623 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 DIAPH2O60879 1101 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 CDK14O94921 469 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SLCO2B1O94956 709 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SIX3O95343 332 aaPredicted RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 EGFP01133 1207 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 FTH1P02794 183 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 TEAD1P28347 426 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 EEF1DP29692 281 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 AKT1P31749 480 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 WASP42768 502 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 INHBCP55103 352 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SH3BP2P78314 561 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 MRPS21P82921 87 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 CDKL1Q00532 357 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 CLCQ05315 142 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 TMEM115Q12893 351 aaPredicted RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 UGT3A2Q3SY77 523 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 ZNF658BQ4V348 819 aaPredicted RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 BCL7AQ4VC05 210 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SLC9B1Q4ZJI4 515 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SH2D4BQ5SQS7 431 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 VWA5B1Q5TIE3 1220 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 SDE2Q6IQ49 451 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 TTC23LQ6PF05 361 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 TRMT11Q7Z4G4 463 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 PHYKPLQ8IUZ5 450 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 CLYBLQ8N0X4 340 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 AFAP1L2Q8N4X5 818 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 RASGEF1AQ8N9B8 481 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 IL17RCQ8NAC3 791 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 CXorf40AQ8TE69 158 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 NAT14Q8WUY8 206 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 EXT2Q93063 718 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 PTCD3Q96EY7 689 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 MSANTD3Q96H12 275 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 NSL1Q96IY1 281 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 MAELQ96JY0 434 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 PHF7Q9BWX1 381 aaPredicted RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 SLC12A9Q9BXP2 914 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 UBE2ZQ9H832 354 aaPredicted RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 TNFRSF12AQ9NP84 129 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 CD274Q9NZQ7 290 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 LIMD1Q9UGP4 676 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 LNPEPQ9UIQ6 1025 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 PTBP2Q9UKA9 531 aaKnown RBP9.37□□□□□ -0.91
CDH13-205ENST00000562307 PCTPQ9UKL6 214 aa9.37□□□□□ -0.91
CDH13-205ENST00000562307 COLQQ9Y215 455 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms