RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SPTBN2O15020 2390 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 KIR2DS5A0A0G2JLQ3 304 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 A0A0G2JNG1 304 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 FAM221BA6H8Z2 402 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 OR2AG2A6NM03 316 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 KIR2DS3K7RE56 304 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 NUDT21O43809 227 aaKnown RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 OR1I1O60431 355 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 FTH1P19P0C7X4 201 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 AKT1P31749 480 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 ELK3P41970 407 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 DUSP3P51452 185 aaPredicted RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 UBE2IP63279 158 aaKnown RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 GUCY2DQ02846 1103 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 KIR2DS5Q14953 304 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 FASTKD3Q14CZ7 662 aaKnown RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 NR0B2Q15466 257 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 LONRF1Q17RB8 773 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 PPM1JQ5JR12 505 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 RNF187Q5TA31 235 aaPredicted RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 MRNIPQ6NTE8 343 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 SLC30A9Q6PML9 568 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 CRTC3Q6UUV7 619 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 FAM83HQ6ZRV2 1179 aaPredicted RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 CYS1Q717R9 158 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 CENPUQ71F23 418 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 RAB44Q7Z6P3 723 aaPredicted RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 AMZ2Q86W34 360 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 RELL1Q8IUW5 271 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 PNPLA1Q8N8W4 532 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDH1-204ENST00000562118 FAM46DQ8NEK8 389 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 OR6P1Q8NGX9 317 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 HM13Q8TCT9 377 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 ZDHHC1Q8WTX9 485 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 ADAMTS14Q8WXS8 1223 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 GLMNQ92990 594 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 NAT6Q93015 286 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 TTC25Q96NG3 672 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 BIRC8Q96P09 236 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 DPH5Q9H2P9 285 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 UCK1Q9HA47 277 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 EPB41L5Q9HCM4 733 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 KLC4Q9NSK0 619 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 INTS10Q9NVR2 710 aaKnown RBP13.19□□□□□ -0.3
CDH1-204ENST00000562118 MOCS1Q9NZB8 636 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 MOSPD1Q9UJG1 213 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 KCNK6Q9Y257 313 aa13.19□□□□□ -0.3
CDH1-204ENST00000562118 OR5K4A6NMS3 321 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 PRMT5O14744 637 aaPredicted RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 RFPL3O75679 317 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 S1PR4O95977 384 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 C1QAP02745 245 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 GLB1P16278 677 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 PPARGP37231 505 aaPredicted RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 RPIAP49247 311 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 SIM1P81133 766 aaPredicted RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 SLC7A5Q01650 507 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 RPA4Q13156 261 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 GBX1Q14549 363 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 SMAD1Q15797 465 aaKnown RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 INSCQ1MX18 579 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 BBS9Q3SYG4 887 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 CDCP2Q5VXM1 449 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 GUSBP11Q6P575 273 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 TAS2R42Q7RTR8 314 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 ERMP1Q7Z2K6 904 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 DGLUCYQ7Z3D6 616 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 ARL14Q8N4G2 192 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 CLDN19Q8N6F1 224 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 BEND7Q8N7W2 519 aaPredicted RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 SLC37A2Q8TED4 501 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 DCUN1D1Q96GG9 259 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 TTC1Q99614 292 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 MCMBPQ9BTE3 642 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 CARD6Q9BX69 1037 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 SARS2Q9NP81 518 aaKnown RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 LATS2Q9NRM7 1088 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 EVA1BQ9NVM1 165 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 SCHIP1Q9P0W5 487 aaPredicted RBP13.18□□□□□ -0.3
CDH1-204ENST00000562118 PADI4Q9UM07 663 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 AKAP13Q12802 2813 aa13.18□□□□□ -0.3
CDH1-204ENST00000562118 NCOR2Q9Y618 2525 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 ESYT3A0FGR9 886 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 SLC5A10A0PJK1 596 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
CDH1-204ENST00000562118 TRIM16O95361 564 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 SLC2A4P14672 509 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 VCLP18206 1134 aa13.17□□□□□ -0.3
CDH1-204ENST00000562118 PMLP29590 882 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms