RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 KIFC1Q9BW19 673 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 RDH14Q9HBH5 336 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 IL1RAPL1Q9NZN1 696 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 TMEM9Q9P0T7 183 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 PSMD13Q9UNM6 376 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 APC2O95996 2303 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 IGHV1OR21-1A0A087WYE8 117 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 RHPN2P1A8MT19 583 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 GOLGA8KD6RF30 607 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 GOLGA8TH3BQL2 631 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 DNALI1O14645 258 aaPredicted RBP13.64□□□□□ -0.23
TPM1-230ENST00000561266 TTI1O43156 1089 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 CASQ1P31415 396 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 MAGEA3P43357 314 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 PRLHRP49683 370 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 MSS51Q4VC12 460 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 METRNLQ641Q3 311 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 AMZ2Q86W34 360 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 JAMLQ86YT9 394 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 OR6C4Q8NGE1 309 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 GPR150Q8NGU9 434 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 OR6P1Q8NGX9 317 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 OR4L1Q8NH43 312 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 LKAAEAR1Q8TD35 194 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 GRK7Q8WTQ7 553 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 JPH3Q8WXH2 748 aaPredicted RBP13.64□□□□□ -0.23
TPM1-230ENST00000561266 PRR11Q96HE9 360 aaPredicted RBP13.64□□□□□ -0.23
TPM1-230ENST00000561266 SIGLEC10Q96LC7 697 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 NRTNQ99748 197 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 TBC1D10AQ9BXI6 508 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 ZCCHC2Q9C0B9 1178 aaKnown RBP13.64□□□□□ -0.23
TPM1-230ENST00000561266 IL22Q9GZX6 179 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 SEMA6CQ9H3T2 930 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 BFARQ9NZS9 450 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 CPNE7Q9UBL6 633 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 SOX13Q9UN79 622 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 DNMT3AQ9Y6K1 912 aaPredicted RBP13.64□□□□□ -0.23
TPM1-230ENST00000561266 USP24Q9UPU5 2620 aa13.64□□□□□ -0.23
TPM1-230ENST00000561266 MGAT4DA6NG13 374 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 PDZK1P1A8MUH7 402 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 D6RAR5 112 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 GAS8O95995 478 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 XRCC1P18887 633 aaPredicted RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 ARCN1P48444 511 aaKnown RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 HHEXQ03014 270 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 SPIDRQ14159 915 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 AGAP9Q5VTM2 703 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 DUS1LQ6P1R4 473 aaKnown RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 AFTPHQ6ULP2 937 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 WASH2PQ6VEQ5 465 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 RBM44Q6ZP01 1051 aaKnown RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 SLITRK4Q8IW52 837 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 OR2L2Q8NH16 312 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 LINC00615Q96LM1 132 aaPredicted RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 C16orf45Q96MC5 204 aaPredicted RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 GFM1Q96RP9 751 aaKnown RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 INSM2Q96T92 566 aaPredicted RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 KRT12Q99456 494 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 WWP1Q9H0M0 922 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 WASH6PQ9NQA3 447 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 OGFRQ9NZT2 677 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 ASIC3Q9UHC3 531 aa13.63□□□□□ -0.23
TPM1-230ENST00000561266 CFAP20Q9Y6A4 193 aaKnown RBP13.63□□□□□ -0.23
TPM1-230ENST00000561266 ACACAQ13085 2346 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 KIR2DS5A0A0G2JLQ3 304 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 A0A0G2JNG1 304 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 KIR2DS3K7RE56 304 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 TCEA3O75764 348 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 VAPBO95292 243 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 MPOP05164 745 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 POLBP06746 335 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 PROS1P07225 676 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 IDSP22304 550 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 MPSTP25325 297 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 PDHA2P29803 388 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 PRAMEP78395 509 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 ZFP36L1Q07352 338 aaKnown RBP13.62□□□□□ -0.23
TPM1-230ENST00000561266 C2orf54Q08AI8 447 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 KIR2DS5Q14953 304 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 RTP5Q14D33 572 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 RPE65Q16518 533 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 IZUMO3Q5VZ72 239 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 NLRP9Q7RTR0 991 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 PPIL6Q8IXY8 311 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 CFAP206Q8IYR0 622 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 UNC5BQ8IZJ1 945 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 DCUN1D1Q96GG9 259 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 SGSM3Q96HU1 749 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 RMDN2Q96LZ7 410 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 WDR83Q9BRX9 315 aaKnown RBP13.62□□□□□ -0.23
TPM1-230ENST00000561266 PLAC1Q9HBJ0 212 aa13.62□□□□□ -0.23
TPM1-230ENST00000561266 MRM3Q9HC36 420 aaKnown RBP13.62□□□□□ -0.23
TPM1-230ENST00000561266 SLC40A1Q9NP59 571 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms