RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 METTL6Q8TCB7 284 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CYGBQ8WWM9 190 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 KCNJ9Q92806 393 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 PPM1MQ96MI6 270 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 PHF12Q96QT6 1004 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SLC22A12Q96S37 553 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ADI1Q9BV57 179 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 KLF16Q9BXK1 252 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 RPF2Q9H7B2 306 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 TRPM5Q9NZQ8 1165 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 IL17CQ9P0M4 197 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ZMYM5Q9UJ78 669 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 POLR3HQ9Y535 204 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 HEMK1Q9Y5R4 338 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 GBF1Q92538 1859 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 A8MX80 341 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 EI24O14681 340 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ASLP04424 464 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ZNF23P17027 643 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CSKP41240 450 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 HSPA7P48741 367 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 MTPNP58546 118 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ELAVL2Q12926 359 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ATP6AP1LQ52LC2 224 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SLC8B1Q6J4K2 584 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 OFCC1Q8IZS5 231 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 TRPV3Q8NET8 790 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 BIRC7Q96CA5 298 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ZNF382Q96SR6 550 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 HAUS8Q9BT25 410 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ACTL8Q9H568 366 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ELOVL2Q9NXB9 296 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 MTRRQ9UBK8 725 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SRRDQ9UH36 339 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SUN2Q9UH99 717 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 VPS9D1Q9Y2B5 631 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SLC30A1Q9Y6M5 507 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 FAM234BA2RU67 622 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CDH2P19022 906 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 GDF5P43026 501 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 PTGER3P43115 390 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ALDH3B2P48448 385 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 TUFMP49411 452 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CLCN4P51793 760 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 MERTKQ12866 999 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 MTA1Q13330 715 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ABRAXAS2Q15018 415 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 NR6A1Q15406 480 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 INTS11Q5TA45 600 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SBSNQ6UWP8 590 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 EFL1Q7Z2Z2 1120 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SERPINA9Q86WD7 417 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ZFAND4Q86XD8 727 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CLDN19Q8N6F1 224 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 PDZD8Q8NEN9 1154 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CENPNQ96H22 339 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CLSTN3Q9BQT9 956 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 NSUN3Q9H649 340 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CWH43Q9H720 699 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 RIC8BQ9NVN3 520 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 NUDT4Q9NZJ9 180 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ZIM2Q9NZV7 527 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 EVLQ9UI08 416 aaPredicted RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 VPS51Q9UID3 782 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ANAPC2Q9UJX6 822 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 GAPDHSO14556 408 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-216ENST00000559819 PFDN6O15212 129 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 TAPBPO15533 448 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 SMAD6O43541 496 aaKnown RBP9.9□□□□□ -0.82
LRRC28-216ENST00000559819 FZD6O60353 706 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 ESR1P03372 595 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 MBL2P11226 248 aaPredicted RBP9.9□□□□□ -0.82
LRRC28-216ENST00000559819 UGT1A1P22309 533 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 UGT1A4P22310 534 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 RFC2P35250 354 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 UGT1A3P35503 534 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 UGT1A5P35504 534 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 CLCN2P51788 898 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 CACNG1Q06432 222 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 GTF2H2Q13888 395 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 TAF12Q16514 161 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 PTRHD1Q6GMV3 140 aaKnown RBP9.9□□□□□ -0.82
LRRC28-216ENST00000559819 GTF2H2CQ6P1K8 395 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 TBPL2Q6SJ96 375 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 SPRED1Q7Z699 444 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 PTRH1Q86Y79 214 aaKnown RBP9.9□□□□□ -0.82
LRRC28-216ENST00000559819 APCDD1Q8J025 514 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 MFSD2AQ8NA29 543 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 RAET1EQ8TD07 263 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 HIC2Q96JB3 615 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 C9orf16Q9BUW7 83 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 APOL5Q9BWW9 433 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 CIPCQ9C0C6 399 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 CLK4Q9HAZ1 481 aaKnown RBP9.9□□□□□ -0.82
LRRC28-216ENST00000559819 DHRS7Q9Y394 339 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 PKP3Q9Y446 797 aa9.9□□□□□ -0.82
LRRC28-216ENST00000559819 H7C0S8 307 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 PRMT5O14744 637 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 FFAR3O14843 346 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms