RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 KLHL33A6NCF5 533 aa21.32■■□□□ 1
SNX1-206ENST00000559389 TM4SF5O14894 197 aa21.32■■□□□ 1
SNX1-206ENST00000559389 KCNJ13O60928 360 aa21.32■■□□□ 1
SNX1-206ENST00000559389 CBFA2T3O75081 653 aa21.32■■□□□ 1
SNX1-206ENST00000559389 S1PR4O95977 384 aa21.32■■□□□ 1
SNX1-206ENST00000559389 F7P08709 466 aaPredicted RBP21.32■■□□□ 1
SNX1-206ENST00000559389 VCLP18206 1134 aa21.32■■□□□ 1
SNX1-206ENST00000559389 PBLDP30039 288 aaPredicted RBP21.32■■□□□ 1
SNX1-206ENST00000559389 ADARP55265 1226 aaKnown RBP21.32■■□□□ 1
SNX1-206ENST00000559389 MPP1Q00013 466 aa21.32■■□□□ 1
SNX1-206ENST00000559389 MGAT5Q09328 741 aa21.32■■□□□ 1
SNX1-206ENST00000559389 ZNF658BQ4V348 819 aaPredicted RBP21.32■■□□□ 1
SNX1-206ENST00000559389 ZCCHC8Q6NZY4 707 aaKnown RBP21.32■■□□□ 1
SNX1-206ENST00000559389 ZNF449Q6P9G9 518 aa21.32■■□□□ 1
SNX1-206ENST00000559389 KIAA0408Q6ZU52 694 aa21.32■■□□□ 1
SNX1-206ENST00000559389 AMZ2Q86W34 360 aa21.32■■□□□ 1
SNX1-206ENST00000559389 C2CD4AQ8NCU7 369 aaPredicted RBP21.32■■□□□ 1
SNX1-206ENST00000559389 CAMK1GQ96NX5 476 aa21.32■■□□□ 1
SNX1-206ENST00000559389 VPS37BQ9H9H4 285 aa21.32■■□□□ 1
SNX1-206ENST00000559389 LRRC4CQ9HCJ2 640 aa21.32■■□□□ 1
SNX1-206ENST00000559389 PPANQ9NQ55 473 aaKnown RBP21.32■■□□□ 1
SNX1-206ENST00000559389 SLC17A6Q9P2U8 582 aa21.32■■□□□ 1
SNX1-206ENST00000559389 GULP1Q9UBP9 304 aa21.32■■□□□ 1
SNX1-206ENST00000559389 GNPTGQ9UJJ9 305 aa21.32■■□□□ 1
SNX1-206ENST00000559389 DNAJC16Q9Y2G8 782 aa21.32■■□□□ 1
SNX1-206ENST00000559389 ASCC3Q8N3C0 2202 aaKnown RBP21.31■■□□□ 1
SNX1-206ENST00000559389 TCRBV9S1A1TA0A576 114 aa21.31■■□□□ 1
SNX1-206ENST00000559389 UBA6A0AVT1 1052 aaPredicted RBP21.31■■□□□ 1
SNX1-206ENST00000559389 A6NCN8 305 aa21.31■■□□□ 1
SNX1-206ENST00000559389 MGAT4DA6NG13 374 aa21.31■■□□□ 1
SNX1-206ENST00000559389 F8W8V4 182 aa21.31■■□□□ 1
SNX1-206ENST00000559389 SIGLEC6O43699 453 aa21.31■■□□□ 1
SNX1-206ENST00000559389 SPAG6O75602 509 aa21.31■■□□□ 1
SNX1-206ENST00000559389 FTH1P02794 183 aa21.31■■□□□ 1
SNX1-206ENST00000559389 GSTM1P09488 218 aa21.31■■□□□ 1
SNX1-206ENST00000559389 OR56A5P0C7T3 313 aa21.31■■□□□ 1
SNX1-206ENST00000559389 EIF3BP55884 814 aaKnown RBP21.31■■□□□ 1
SNX1-206ENST00000559389 GSTM4Q03013 218 aa21.31■■□□□ 1
SNX1-206ENST00000559389 ZNF789Q5FWF6 425 aa21.31■■□□□ 1
SNX1-206ENST00000559389 TEDDM1Q5T9Z0 273 aa21.31■■□□□ 1
SNX1-206ENST00000559389 XKR5Q6UX68 686 aa21.31■■□□□ 1
SNX1-206ENST00000559389 GALNT7Q86SF2 657 aa21.31■■□□□ 1
SNX1-206ENST00000559389 GSPT2Q8IYD1 628 aaKnown RBP21.31■■□□□ 1
SNX1-206ENST00000559389 FAM181AQ8N9Y4 354 aa21.31■■□□□ 1
SNX1-206ENST00000559389 FAM46DQ8NEK8 389 aa21.31■■□□□ 1
SNX1-206ENST00000559389 OR2L2Q8NH16 312 aa21.31■■□□□ 1
SNX1-206ENST00000559389 HM13Q8TCT9 377 aa21.31■■□□□ 1
SNX1-206ENST00000559389 CDC42EP4Q9H3Q1 356 aaKnown RBP21.31■■□□□ 1
SNX1-206ENST00000559389 OSGEPL1Q9H4B0 414 aa21.31■■□□□ 1
SNX1-206ENST00000559389 FBXO6Q9NRD1 293 aaPredicted RBP21.31■■□□□ 1
SNX1-206ENST00000559389 SPATS2LQ9NUQ6 558 aaKnown RBP21.31■■□□□ 1
SNX1-206ENST00000559389 NINJ2Q9NZG7 142 aa21.31■■□□□ 1
SNX1-206ENST00000559389 PCDHB1Q9Y5F3 818 aa21.31■■□□□ 1
SNX1-206ENST00000559389 FRYLO94915 3013 aa21.3■■□□□ 1
SNX1-206ENST00000559389 C1QAP02745 245 aa21.3■■□□□ 1
SNX1-206ENST00000559389 MYBL2P10244 700 aa21.3■■□□□ 1
SNX1-206ENST00000559389 NFE2L1Q14494 772 aa21.3■■□□□ 1
SNX1-206ENST00000559389 RSPO4Q2I0M5 234 aaPredicted RBP21.3■■□□□ 1
SNX1-206ENST00000559389 PROX2Q3B8N5 592 aa21.3■■□□□ 1
SNX1-206ENST00000559389 CTSL3PQ5NE16 218 aa21.3■■□□□ 1
SNX1-206ENST00000559389 FAM83HQ6ZRV2 1179 aaPredicted RBP21.3■■□□□ 1
SNX1-206ENST00000559389 CYS1Q717R9 158 aa21.3■■□□□ 1
SNX1-206ENST00000559389 ARL10Q8N8L6 244 aa21.3■■□□□ 1
SNX1-206ENST00000559389 KYQ8NBH2 561 aa21.3■■□□□ 1
SNX1-206ENST00000559389 LKAAEAR1Q8TD35 194 aa21.3■■□□□ 1
SNX1-206ENST00000559389 RHBDD1Q8TEB9 315 aa21.3■■□□□ 1
SNX1-206ENST00000559389 UBXN4Q92575 508 aa21.3■■□□□ 1
SNX1-206ENST00000559389 BIRC8Q96P09 236 aa21.3■■□□□ 1
SNX1-206ENST00000559389 CCM2Q9BSQ5 444 aa21.3■■□□□ 1
SNX1-206ENST00000559389 RRAGDQ9NQL2 400 aaPredicted RBP21.3■■□□□ 1
SNX1-206ENST00000559389 ZFATQ9P243 1243 aa21.3■■□□□ 1
SNX1-206ENST00000559389 TBC1D29Q9UFV1 150 aa21.3■■□□□ 1
SNX1-206ENST00000559389 ZNF292O60281 2723 aa21.3■■□□□ 1
SNX1-206ENST00000559389 LY6G6EA0A0G2JKS1 128 aa21.29■■□□□ 1
SNX1-206ENST00000559389 C17orf113A0A1B0GUU1 675 aa21.29■■□□□ 1
SNX1-206ENST00000559389 B4DGG1 531 aa21.29■■□□□ 1
SNX1-206ENST00000559389 NOBOXO60393 691 aa21.29■■□□□ 1
SNX1-206ENST00000559389 EML2O95834 649 aa21.29■■□□□ 1
SNX1-206ENST00000559389 ESR1P03372 595 aa21.29■■□□□ 1
SNX1-206ENST00000559389 CSRP1P21291 193 aaKnown RBP21.29■■□□□ 1
SNX1-206ENST00000559389 SDHBP21912 280 aa21.29■■□□□ 1
SNX1-206ENST00000559389 STX2P32856 288 aa21.29■■□□□ 1
SNX1-206ENST00000559389 LEPRP48357 1165 aaKnown RBP21.29■■□□□ 1
SNX1-206ENST00000559389 PTRHD1Q6GMV3 140 aaKnown RBP21.29■■□□□ 1
SNX1-206ENST00000559389 C3orf62Q6ZUJ4 267 aa21.29■■□□□ 1
SNX1-206ENST00000559389 SLC35F3Q8IY50 421 aa21.29■■□□□ 1
SNX1-206ENST00000559389 APOLD1Q96LR9 279 aa21.29■■□□□ 1
SNX1-206ENST00000559389 DPEP2Q9H4A9 486 aa21.29■■□□□ 1
SNX1-206ENST00000559389 COG4Q9H9E3 785 aa21.29■■□□□ 1
SNX1-206ENST00000559389 SMYD2Q9NRG4 433 aa21.29■■□□□ 1
SNX1-206ENST00000559389 SIRPGQ9P1W8 387 aa21.29■■□□□ 1
SNX1-206ENST00000559389 FTSJ1Q9UET6 329 aa21.29■■□□□ 1
SNX1-206ENST00000559389 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.29■■□□□ 1
SNX1-206ENST00000559389 CRYL1Q9Y2S2 319 aa21.29■■□□□ 1
SNX1-206ENST00000559389 U3KQA8 63 aa21.29■■□□□ 1
SNX1-206ENST00000559389 V9GYY5 206 aaPredicted RBP21.29■■□□□ 1
SNX1-206ENST00000559389 CABIN1Q9Y6J0 2220 aa21.29■■□□□ 1
SNX1-206ENST00000559389 FAM159BA6NKW6 160 aa21.28■■□□□ 1
SNX1-206ENST00000559389 H3BMM5 538 aa21.28■■□□□ 1
SNX1-206ENST00000559389 FAM153BP0C7A2 387 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms