RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 EBNA1BP2Q99848 306 aaKnown RBP16.61■□□□□ 0.25
PSEN1-224ENST00000559361 LRRC61Q9BV99 259 aa16.61■□□□□ 0.25
PSEN1-224ENST00000559361 FAM83DQ9H4H8 585 aa16.61■□□□□ 0.25
PSEN1-224ENST00000559361 APOBEC3BQ9UH17 382 aaKnown RBP16.61■□□□□ 0.25
PSEN1-224ENST00000559361 MAD1L1Q9Y6D9 718 aa16.61■□□□□ 0.25
PSEN1-224ENST00000559361 ARHGEF17Q96PE2 2063 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 TMX2-CTNND1H3BSU7 103 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 NVLO15381 856 aaKnown RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 SLC4A1P02730 911 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 TSHRP16473 764 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 BPIP17213 487 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 DHX9Q08211 1270 aaKnown RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 PDIA2Q13087 525 aaKnown RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 MTM1Q13496 603 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 ITGA9Q13797 1035 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 PTK2BQ14289 1009 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 SLMAPQ14BN4 828 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 PTPRRQ15256 657 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 HENMT1Q5T8I9 393 aaKnown RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 DENND2CQ68D51 928 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 Q6ZVL8 140 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 PHACTR4Q8IZ21 702 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 TRAM1L1Q8N609 369 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 OR4K2Q8NGD2 314 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 GABPB2Q8TAK5 448 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-224ENST00000559361 AP2M1Q96CW1 435 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 TREX1Q9NSU2 369 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 RABGEF1Q9UJ41 708 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 TEX264Q9Y6I9 313 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 LRRK1Q38SD2 2015 aa16.6■□□□□ 0.25
PSEN1-224ENST00000559361 GLYATL1P3A0A0U1RQE8 302 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 SPAG6O75602 509 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 ANXA6P08133 673 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 GSTA2P09210 222 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 FAM87AP0C7U9 286 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 LIPCP11150 499 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 GM2AP17900 193 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 ECHS1P30084 290 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 CCKBRP32239 447 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 YPEL5P62699 121 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 PRAMEP78395 509 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 CRADDP78560 199 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 FRG1Q14331 258 aaKnown RBP16.59■□□□□ 0.25
PSEN1-224ENST00000559361 TRADDQ15628 312 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 SPANXN3Q5MJ09 141 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 KIAA0930Q6ICG6 404 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-224ENST00000559361 AFTPHQ6ULP2 937 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 ZBED8Q8IZ13 594 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 TP53I13Q8NBR0 393 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-224ENST00000559361 PYROXD1Q8WU10 500 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 SCG3Q8WXD2 468 aaKnown RBP16.59■□□□□ 0.25
PSEN1-224ENST00000559361 DNAJC1Q96KC8 554 aaKnown RBP16.59■□□□□ 0.25
PSEN1-224ENST00000559361 ARHGAP9Q9BRR9 750 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 ABCG8Q9H221 673 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 CHRAC1Q9NRG0 131 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 SMOXQ9NWM0 555 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 ZC3H7BQ9UGR2 993 aaKnown RBP16.59■□□□□ 0.25
PSEN1-224ENST00000559361 NFU1Q9UMS0 254 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 RPS6KL1Q9Y6S9 549 aa16.59■□□□□ 0.25
PSEN1-224ENST00000559361 A0A1W2PQM1 296 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 D6RAR5 112 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 NTRK1P04629 796 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 HOXC4P09017 264 aaPredicted RBP16.58■□□□□ 0.24
PSEN1-224ENST00000559361 ELK3P41970 407 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 TBR1Q16650 682 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 WSCD2Q2TBF2 565 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 GPR33Q49SQ1 333 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 MSS51Q4VC12 460 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 ZNF449Q6P9G9 518 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 ADAMTSL4Q6UY14 1074 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 LMNTD2Q8IXW0 634 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 MPP5Q8N3R9 675 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 GPR26Q8NDV2 337 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 FBXO36Q8NEA4 188 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 OR13C4Q8NGS5 318 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 OR13J1Q8NGT2 312 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.58■□□□□ 0.24
PSEN1-224ENST00000559361 ULK4Q96C45 1275 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 CDKN2AIPNLQ96HQ2 116 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 TTC25Q96NG3 672 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 VPS35Q96QK1 796 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 GFM1Q96RP9 751 aaKnown RBP16.58■□□□□ 0.24
PSEN1-224ENST00000559361 SLC13A1Q9BZW2 595 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 BPIFA1Q9NP55 256 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 IL26Q9NPH9 171 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 ANKMY1Q9P2S6 941 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 COQ6Q9Y2Z9 468 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 PCDHGA4Q9Y5G9 962 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 SLC30A1Q9Y6M5 507 aa16.58■□□□□ 0.24
PSEN1-224ENST00000559361 LRP4O75096 1905 aa16.57■□□□□ 0.24
PSEN1-224ENST00000559361 SRP72O76094 671 aaKnown RBP16.57■□□□□ 0.24
PSEN1-224ENST00000559361 PRAMEF1O95521 474 aa16.57■□□□□ 0.24
PSEN1-224ENST00000559361 HGFP14210 728 aa16.57■□□□□ 0.24
PSEN1-224ENST00000559361 ITGALP20701 1170 aa16.57■□□□□ 0.24
PSEN1-224ENST00000559361 IGFALSP35858 605 aa16.57■□□□□ 0.24
PSEN1-224ENST00000559361 TRIM23P36406 574 aa16.57■□□□□ 0.24
PSEN1-224ENST00000559361 PPARGP37231 505 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms