RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PAQR3Q6TCH7 311 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 TRAPPC5Q8IUR0 188 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 BANPQ8N9N5 519 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 MFSD2AQ8NA29 543 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 OR56A4Q8NGH8 313 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 INPP5DQ92835 1189 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 ALKBH8Q96BT7 664 aaKnown RBP17.8■□□□□ 0.44
CLPX-203ENST00000558958 SCARF2Q96GP6 870 aaPredicted RBP17.8■□□□□ 0.44
CLPX-203ENST00000558958 LINC00615Q96LM1 132 aaPredicted RBP17.8■□□□□ 0.44
CLPX-203ENST00000558958 WDR92Q96MX6 357 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 CCM2Q9BSQ5 444 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 VPS11Q9H270 941 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 RMI1Q9H9A7 625 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 SARS2Q9NP81 518 aaKnown RBP17.8■□□□□ 0.44
CLPX-203ENST00000558958 AASDHPPTQ9NRN7 309 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 FAM53CQ9NYF3 392 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 KLHL42Q9P2K6 505 aa17.8■□□□□ 0.44
CLPX-203ENST00000558958 TRMT6Q9UJA5 497 aaKnown RBP17.8■□□□□ 0.44
CLPX-203ENST00000558958 GON4LQ3T8J9 2241 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 A0A087X1B8 175 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 A0A1W2PR77 199 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 PRR33A8MZF0 331 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 THEGLP0DJG4 465 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 BRAFP15056 766 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 ZNF37AP17032 561 aaPredicted RBP17.79■□□□□ 0.44
CLPX-203ENST00000558958 AOAHP28039 575 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 CCR7P32248 378 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 GMPRP36959 345 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 IRF9Q00978 393 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 PLK5Q496M5 336 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 CRTC3Q6UUV7 619 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 ARMCX6Q7L4S7 300 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 OTOAQ7RTW8 1153 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 C11orf96Q7Z7L8 435 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 CLEC14AQ86T13 490 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 LRRTM4Q86VH4 590 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 SLC22A18ASQ8N1D0 253 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 ZBTB2Q8N680 514 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 ZBTB44Q8NCP5 570 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 UBXN10Q96LJ8 280 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 SLC13A1Q9BZW2 595 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 MIR1-1HGQ9H1L0 117 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 FGF22Q9HCT0 170 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 TM9SF3Q9HD45 589 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 SSU72Q9NP77 194 aaKnown RBP17.79■□□□□ 0.44
CLPX-203ENST00000558958 MKS1Q9NXB0 559 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 ANKRD6Q9Y2G4 727 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 CEP192Q8TEP8 1941 aa17.79■□□□□ 0.44
CLPX-203ENST00000558958 TNFRSF10CO14798 259 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 KPNA5O15131 536 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 GRID2O43424 1007 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 TYROBPO43914 113 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 GSTM1P09488 218 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 COL6A2P12110 1019 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 CD38P28907 300 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 SLC26A3P40879 764 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 GSTM4Q03013 218 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 ZNF658BQ4V348 819 aaPredicted RBP17.78■□□□□ 0.44
CLPX-203ENST00000558958 ENPP7Q6UWV6 458 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 IQCHQ86VS3 1027 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 KMT2EQ8IZD2 1858 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 RGL4Q8IZJ4 473 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 CENPLQ8N0S6 344 aaPredicted RBP17.78■□□□□ 0.44
CLPX-203ENST00000558958 ANKRD49Q8WVL7 239 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 KLHDC7BQ96G42 594 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 APOPT1Q96IL0 206 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 C1QTNF1Q9BXJ1 281 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 SYTL2Q9HCH5 934 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 GULP1Q9UBP9 304 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 ZNHIT2Q9UHR6 403 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 PRKAB1Q9Y478 270 aa17.78■□□□□ 0.44
CLPX-203ENST00000558958 DNMT3AQ9Y6K1 912 aaPredicted RBP17.78■□□□□ 0.44
CLPX-203ENST00000558958 SPTY2D1-AS1A0A0U1RR47 76 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 C17orf113A0A1B0GUU1 675 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 PRSS38A1L453 326 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 COPEO14579 308 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 KMOO15229 486 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 SPAG7O75391 227 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 POP7O75817 140 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 TOP3BO95985 862 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 WNT1P04628 370 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 CCDC166P0CW27 439 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 CRHR1P34998 444 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 CCT5P48643 541 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 NUBP1P53384 320 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 OVGP1Q12889 678 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 PTK2BQ14289 1009 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 LYSMD4Q5XG99 296 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 NAPRTQ6XQN6 538 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 TBC1D1Q86TI0 1168 aaPredicted RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 DCP2Q8IU60 420 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 PLD6Q8N2A8 252 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 NKAPQ8N5F7 415 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 OR1E3Q8WZA6 343 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 ELMO1Q92556 727 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 ZC3H10Q96K80 434 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 MRPL40Q9NQ50 206 aaKnown RBP17.77■□□□□ 0.44
CLPX-203ENST00000558958 DCDC2Q9UHG0 476 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 SUFUQ9UMX1 484 aa17.77■□□□□ 0.44
CLPX-203ENST00000558958 THADAQ6YHU6 1953 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms