RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 ZNF483Q8TF39 744 aaPredicted RBP9.98□□□□□ -0.81
MARK3-213ENST00000558611 RNF139Q8WU17 664 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 HMGB4Q8WW32 186 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 ATOH1Q92858 354 aaPredicted RBP9.98□□□□□ -0.81
MARK3-213ENST00000558611 CD101Q93033 1021 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 KRTAP4-6Q9BYQ5 205 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 PRDM13Q9H4Q3 707 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 PRMT8Q9NR22 394 aaPredicted RBP9.98□□□□□ -0.81
MARK3-213ENST00000558611 SMYD2Q9NRG4 433 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 FBXO4Q9UKT5 387 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 CNOT6Q9ULM6 557 aaKnown RBP9.98□□□□□ -0.81
MARK3-213ENST00000558611 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.98□□□□□ -0.81
MARK3-213ENST00000558611 NUP205Q92621 2012 aa9.98□□□□□ -0.81
MARK3-213ENST00000558611 THADAQ6YHU6 1953 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 E5RJQ4 531 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 EPHB6O15197 1021 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 SUN1O94901 812 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 EGFP01133 1207 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 HMBSP08397 361 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 SP9P0CG40 484 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 DRD1P21728 446 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 CHMP24386 653 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 UQCRC1P31930 480 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 EIF2DP41214 584 aaKnown RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 RAD52P43351 418 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 UBXN1Q04323 297 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 GAD2Q05329 585 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 GRM7Q14831 915 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 SYCP1Q15431 976 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 NRN1LQ496H8 165 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 ANO7Q6IWH7 933 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 MSANTD2Q6P1R3 559 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 Q6ZS52 159 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 SYT12Q8IV01 421 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 SPEM1Q8N4L4 309 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 DACT3Q96B18 629 aaPredicted RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 ERGIC2Q96RQ1 377 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 DCLK3Q9C098 648 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 MIS12Q9H081 205 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 LHX5Q9H2C1 402 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 FBRSL1Q9HCM7 1045 aaKnown RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 SPHK2Q9NRA0 654 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 FAM207AQ9NSI2 230 aaPredicted RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 LIN7CQ9NUP9 197 aaKnown RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 ZNF510Q9Y2H8 683 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 HBS1LQ9Y450 684 aaKnown RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 TNRC6BQ9UPQ9 1833 aaKnown RBP9.97□□□□□ -0.81
MARK3-213ENST00000558611 ZNF292O60281 2723 aa9.97□□□□□ -0.81
MARK3-213ENST00000558611 STX16-NPEPL1H3BU86 382 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 STX16O14662 325 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 PAPSS1O43252 624 aaPredicted RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 CBFA2T3O75081 653 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 KLKB1P03952 638 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 CSF1P09603 554 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 CYP11B1P15538 503 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 CORO1AP31146 461 aaKnown RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 NBL1P41271 181 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 ANXA11P50995 505 aaKnown RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 CCR3P51677 355 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 POLR2FP61218 127 aaKnown RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 SF3A3Q12874 501 aaKnown RBP eCLIP9.96□□□□□ -0.82
MARK3-213ENST00000558611 CLCA4Q14CN2 919 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 ELAVL1Q15717 326 aaKnown RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 ZNF528Q3MIS6 628 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 FBXO43Q4G163 708 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 WDR45BQ5MNZ6 344 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 FAM102AQ5T9C2 384 aaPredicted RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 ARHGAP40Q5TG30 622 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.96□□□□□ -0.82
MARK3-213ENST00000558611 TMEM110Q86TL2 294 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 TMEM25Q86YD3 366 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 WDTC1Q8N5D0 677 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 NEK11Q8NG66 645 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 FAM149B1Q96BN6 582 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 CPXM1Q96SM3 734 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 TRIM62Q9BVG3 475 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 GPR34Q9UPC5 381 aa9.96□□□□□ -0.82
MARK3-213ENST00000558611 FAM186AA6NE01 2351 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 ZFHX2Q9C0A1 2572 aaPredicted RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 TOR1BO14657 336 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 MSI1O43347 362 aaKnown RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 CACNG3O60359 315 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 PAPSS2O95340 614 aaPredicted RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 CER1O95813 267 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 FYNP06241 537 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 TDGF1P13385 188 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 EPHA3P29320 983 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 NTSR1P30989 418 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 CDH5P33151 784 aaPredicted RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 CSTF1Q05048 431 aaKnown RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 KDSRQ06136 332 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 CCNG2Q16589 344 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 TSTQ16762 297 aaKnown RBP9.95□□□□□ -0.82
MARK3-213ENST00000558611 ZSCAN23Q3MJ62 389 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 TBRG1Q3YBR2 411 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 ZNF385BQ569K4 471 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 FAM205BPQ63HN1 556 aa9.95□□□□□ -0.82
MARK3-213ENST00000558611 RGS7BPQ6MZT1 257 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms