RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 AMZ2Q86W34 360 aa17.16■□□□□ 0.34
TPM1-214ENST00000558544 LMNTD2Q8IXW0 634 aa17.16■□□□□ 0.34
TPM1-214ENST00000558544 DEFB124Q8NES8 71 aa17.16■□□□□ 0.34
TPM1-214ENST00000558544 SCG3Q8WXD2 468 aaKnown RBP17.16■□□□□ 0.34
TPM1-214ENST00000558544 FBXO6Q9NRD1 293 aaPredicted RBP17.16■□□□□ 0.34
TPM1-214ENST00000558544 SPATS2LQ9NUQ6 558 aaKnown RBP17.16■□□□□ 0.34
TPM1-214ENST00000558544 SIRPGQ9P1W8 387 aa17.16■□□□□ 0.34
TPM1-214ENST00000558544 PCNX2A6NKB5 2137 aa17.16■□□□□ 0.34
TPM1-214ENST00000558544 PRMT5O14744 637 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 PFDN6O15212 129 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 SNX2O60749 519 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 OR56A5P0C7T3 313 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 VCLP18206 1134 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 EIF3BP55884 814 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 ZCCHC8Q6NZY4 707 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 LVRNQ6Q4G3 990 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 SFTPA2Q8IWL1 248 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 GSPT2Q8IYD1 628 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 MYRIPQ8NFW9 859 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 BAHD1Q8TBE0 780 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 LPGAT1Q92604 370 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 LINC00615Q96LM1 132 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 TCF12Q99081 682 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 P2RY12Q9H244 342 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 DPEP2Q9H4A9 486 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 ANKZF1Q9H8Y5 726 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 FTSJ1Q9UET6 329 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.15■□□□□ 0.34
TPM1-214ENST00000558544 CRYL1Q9Y2S2 319 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 DNMT3AQ9Y6K1 912 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 V9GYY5 206 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 QSOX1O00391 747 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 TM4SF5O14894 197 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 CBFA2T3O75081 653 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 EML2O95834 649 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 S1PR4O95977 384 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 MYF5P13349 255 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 ITGB6P18564 788 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 GPX6P59796 221 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 FRG1Q14331 258 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 NFE2L1Q14494 772 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 TEDDM1Q5T9Z0 273 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 FAM83HQ6ZRV2 1179 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 CEP128Q6ZU80 1094 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 CNTN4Q8IWV2 1026 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 KYQ8NBH2 561 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 GABPB2Q8TAK5 448 aaPredicted RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 ZDHHC1Q8WTX9 485 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 CNDP2Q96KP4 475 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 INTS10Q9NVR2 710 aaKnown RBP17.15■□□□□ 0.34
TPM1-214ENST00000558544 TBC1D29Q9UFV1 150 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 GNPTGQ9UJJ9 305 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 FBXO5Q9UKT4 447 aa17.15■□□□□ 0.34
TPM1-214ENST00000558544 DCHS1Q96JQ0 3298 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 MGAT4DA6NG13 374 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 PRR19A6NJB7 356 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 LDOC1O95751 146 aaPredicted RBP17.14■□□□□ 0.33
TPM1-214ENST00000558544 RPS3P23396 243 aaKnown RBP eCLIP17.14■□□□□ 0.33
TPM1-214ENST00000558544 FMO4P31512 558 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 CLCNKAP51800 687 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 DMPKQ09013 629 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 MGAT5Q09328 741 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 PROX2Q3B8N5 592 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 CTSL3PQ5NE16 218 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 PTRHD1Q6GMV3 140 aaKnown RBP17.14■□□□□ 0.33
TPM1-214ENST00000558544 C3orf62Q6ZUJ4 267 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 LRRC6Q86X45 466 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 SLC35F3Q8IY50 421 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 KRT222Q8N1A0 295 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 LILRA3Q8N6C8 439 aaPredicted RBP17.14■□□□□ 0.33
TPM1-214ENST00000558544 C2CD4AQ8NCU7 369 aaPredicted RBP17.14■□□□□ 0.33
TPM1-214ENST00000558544 OR2L2Q8NH16 312 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 HM13Q8TCT9 377 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 LKAAEAR1Q8TD35 194 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 PATE1Q8WXA2 126 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 CCM2Q9BSQ5 444 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 RTKNQ9BST9 563 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 TSPYL1Q9H0U9 437 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 CDC42EP4Q9H3Q1 356 aaKnown RBP17.14■□□□□ 0.33
TPM1-214ENST00000558544 SLC32A1Q9H598 525 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 LRRC4CQ9HCJ2 640 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 PRDM8Q9NQV8 689 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 MOCS1Q9NZB8 636 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 NINJ2Q9NZG7 142 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 ZFATQ9P243 1243 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 GULP1Q9UBP9 304 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 VPS9D1Q9Y2B5 631 aa17.14■□□□□ 0.33
TPM1-214ENST00000558544 SPEGQ15772 3267 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 LY6G6EA0A0G2JKS1 128 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 TCRBV9S1A1TA0A576 114 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 IQCF5A8MTL0 148 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 PDZK1P1A8MUH7 402 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 NOBOXO60393 691 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 KCNJ13O60928 360 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 HAUS5O94927 633 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 FTH1P02794 183 aa17.13■□□□□ 0.33
TPM1-214ENST00000558544 GSTA2P09210 222 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms