RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CYP2A6P11509 494 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 NID1P14543 1247 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TYRP1P17643 537 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 HTR7P34969 479 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 DCTP40126 519 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 NOP2P46087 812 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 GPR1P46091 355 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 IDH3AP50213 366 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 RENBPP51606 427 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 AIF1P55008 147 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 GFERP55789 205 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 RPL7AP62424 266 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 DPTQ07507 201 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SLC10A7Q0GE19 358 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TRAF2Q12933 501 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 LRP8Q14114 963 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 DOC2BQ14184 412 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 RFTN1Q14699 578 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 CA9Q16790 459 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TPD52L1Q16890 204 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 NADK2Q4G0N4 442 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PRR30Q53SZ7 412 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 IYDQ6PHW0 289 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 ADAMTSL4Q6UY14 1074 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 RFX8Q6ZV50 586 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 MON1BQ7L1V2 547 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TECPR1Q7Z6L1 1165 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PHF13Q86YI8 300 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 GALNT13Q8IUC8 556 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 FAM114A1Q8IWE2 563 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TP53INP2Q8IXH6 220 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PGBD5Q8N414 524 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SCAMP4Q969E2 229 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 KISS1RQ969F8 398 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 STAMBPL1Q96FJ0 436 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 ELMO2Q96JJ3 720 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 PSKH2Q96QS6 385 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 MCCC1Q96RQ3 725 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 AGAP2Q99490 1192 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 CNPY3Q9BT09 278 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 DHRS4Q9BTZ2 278 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TBC1D10AQ9BXI6 508 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TRIM8Q9BZR9 551 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TWSG1Q9GZX9 223 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 VPS16Q9H269 839 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 GANQ9H2C0 597 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 NOD2Q9HC29 1040 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SARS2Q9NP81 518 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 DONSONQ9NYP3 566 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 ZFATQ9P243 1243 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 RCOR3Q9P2K3 495 aaPredicted RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 TBC1D29Q9UFV1 150 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 AP4E1Q9UPM8 1137 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 KCNK6Q9Y257 313 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 LUC7L2Q9Y383 392 aaKnown RBP5.78□□□□□ -1.48
VPS33B-207ENST00000557470 SHANK1Q9Y566 2161 aa5.78□□□□□ -1.48
VPS33B-207ENST00000557470 POLQO75417 2590 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF106Q9H2Y7 1883 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 C2CD3Q4AC94 2353 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PIPSLA2A3N6 862 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 A6NCN8 305 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 TCP11X1B4DZS4 312 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 EPHB6O15197 1021 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 INPP4BO15327 924 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 DAPK3O43293 454 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 KIAA0754O94854 1291 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 NDUFA10O95299 355 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PEX11BO96011 259 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 C9P02748 559 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ATP1A1P05023 1023 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CALB1P05937 261 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CTPS1P17812 591 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ERCC2P18074 760 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CES1P23141 567 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CASP14P31944 242 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 KLK7P49862 253 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 SEPHS1P49903 392 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PGDP52209 483 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 JAM2P57087 298 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 POLR2FP61218 127 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 OGDHQ02218 1023 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 IL10RBQ08334 325 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 MRPL49Q13405 166 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 SEMA5AQ13591 1074 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 DNASE1L3Q13609 305 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 GBX1Q14549 363 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF235Q14590 738 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 KRT72Q14CN4 511 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CAMK4Q16566 473 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 EIF2S3LQ2VIR3 472 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 FOXB2Q5VYV0 432 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CPZQ66K79 652 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 LRRC66Q68CR7 880 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 DNAJC24Q6P3W2 148 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 TRIM72Q6ZMU5 477 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 USP45Q70EL2 814 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CHST15Q7LFX5 561 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 MAMDC2Q7Z304 686 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms