RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 B4E171 279 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 MKRN2OSH3BPM6 223 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 DUX1O43812 170 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 KDM1AO60341 852 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ZMPSTE24O75844 475 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 RHOBTB3O94955 611 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ADCY5O95622 1261 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 POP4O95707 220 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 IL18BPO95998 194 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 PRKAR1AP10644 381 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TCN2P20062 427 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TNFRSF8P28908 595 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CD1CP29017 333 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ALDH4A1P30038 563 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CSTF2P33240 577 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 DCTP40126 519 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TSPAN7P41732 249 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 UQCRFS1P47985 274 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ME1P48163 572 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 SUOXP51687 545 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 COPB1P53618 953 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 LIMK2P53671 638 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 OR1D5P58170 312 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 PITX1P78337 314 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CDC20Q12834 499 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 NFATC4Q14934 902 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CDSNQ15517 529 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TAF5Q15542 800 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 MEA1Q16626 185 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 KLHL40Q2TBA0 621 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 MYLK3Q32MK0 819 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 MAP9Q49MG5 647 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CBWD6Q4V339 395 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ALFQ53S48 1182 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CBWD3Q5JTY5 395 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 EFHC1Q5JVL4 640 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TRMT10BQ6PF06 316 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ASB18Q6ZVZ8 466 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TMPRSS9Q7Z410 1059 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CCDC13Q8IYE1 715 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 STPG3Q8N7X2 389 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 NLGN4YQ8NFZ3 816 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CPT1CQ8TCG5 803 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 CXorf40AQ8TE69 158 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 MBD6Q96DN6 1003 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 AHCYL2Q96HN2 611 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 WDR92Q96MX6 357 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 NT5C1BQ96P26 610 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 SLC2A13Q96QE2 648 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TEFMQ96QE5 360 aaKnown RBP4.84□□□□□ -1.63
ATXN3-239ENST00000556315 DPYSL5Q9BPU6 564 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 APOOQ9BUR5 198 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 SPRY4Q9C004 299 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 DPEP2Q9H4A9 486 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ZDHHC6Q9H6R6 413 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 WDCPQ9H6R7 721 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 RDH14Q9HBH5 336 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TMEM51Q9NW97 253 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 COX16Q9P0S2 106 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 PPP4R1LQ9P1A2 415 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 USP25Q9UHP3 1055 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 PILRAQ9UKJ1 303 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 PCDHA7Q9UN72 937 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 TP53TG5Q9Y2B4 290 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 RELNP78509 3460 aa4.84□□□□□ -1.63
ATXN3-239ENST00000556315 BSNQ9UPA5 3926 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 LOC101059948A0A1B0GTJ6 334 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 WIPF3A6NGB9 483 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 RHPN2P1A8MT19 583 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 E5RJQ4 531 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 K7EM74 188 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 PMM2O15305 246 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 MED7O43513 233 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 HSF2BPO75031 334 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 PRKD3O94806 890 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 APOL3O95236 402 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 GSRP00390 522 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 UGT2B4P06133 528 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 HOXC4P09017 264 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 KELP23276 732 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 OAS2P29728 719 aaKnown RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 OR1E1P30953 314 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 MAN1A1P33908 653 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 GPR3P46089 330 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 CXCR3P49682 368 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 SNX16P57768 344 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 SNRPD1P62314 119 aaKnown RBP4.83□□□□□ -1.64
ATXN3-239ENST00000556315 IL13RA1P78552 427 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ARF5P84085 180 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 RAD51Q06609 339 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ADCY2Q08462 1091 aa4.83□□□□□ -1.64
ATXN3-239ENST00000556315 ABHD18Q0P651 414 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms