RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 ZNF514Q96K75 400 aaPredicted RBP20.21■□□□□ 0.83
FOXN3-209ENST00000555353 COPS8Q99627 209 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 ABCG4Q9H172 646 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 OSGEPL1Q9H4B0 414 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 CHRAC1Q9NRG0 131 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 KLC4Q9NSK0 619 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 SLC2A6Q9UGQ3 507 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 OR2AG2A6NM03 316 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 BANF1O75531 89 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 POLBP06746 335 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 ZNF7P17097 686 aaPredicted RBP20.21■□□□□ 0.83
FOXN3-209ENST00000555353 VCLP18206 1134 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 PRAMEP78395 509 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 BIRC2Q13490 618 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 HP1BP3Q5SSJ5 553 aaPredicted RBP20.21■□□□□ 0.83
FOXN3-209ENST00000555353 AFTPHQ6ULP2 937 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 HEXDCQ8WVB3 486 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.21■□□□□ 0.833e-6■■■■■ 37.7
FOXN3-209ENST00000555353 ZNF778Q96MU6 729 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 TIMM29Q9BSF4 260 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 KIFC1Q9BW19 673 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 DNAJC16Q9Y2G8 782 aa20.21■□□□□ 0.83
FOXN3-209ENST00000555353 FAM237BA0A1B0GVD1 139 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 CCDC162PA2VCL2 907 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 SPAG6O75602 509 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 TOP3BO95985 862 aaKnown RBP20.2■□□□□ 0.82
FOXN3-209ENST00000555353 GSTA2P09210 222 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 ACRV1P26436 265 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 CDKN1CP49918 316 aaPredicted RBP20.2■□□□□ 0.82
FOXN3-209ENST00000555353 ACVR1Q04771 509 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 FASTKD3Q14CZ7 662 aaKnown RBP20.2■□□□□ 0.82
FOXN3-209ENST00000555353 TMEM220Q6QAJ8 160 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 DET1Q7L5Y6 550 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 SERPINA9Q86WD7 417 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 SFTPA2Q8IWL1 248 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 GALNT15Q8N3T1 639 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 OR6P1Q8NGX9 317 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 MAPK15Q8TD08 544 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 C9orf72Q96LT7 481 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 SCNM1Q9BWG6 230 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 CDC42EP4Q9H3Q1 356 aaKnown RBP20.2■□□□□ 0.82
FOXN3-209ENST00000555353 ANGPTL2Q9UKU9 493 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 PIKFYVEQ9Y2I7 2098 aa20.2■□□□□ 0.82
FOXN3-209ENST00000555353 TRBV5-4A0A0C4DH59 114 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 OR51F1A6NGY5 319 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 SNX2O60749 519 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 GLB1P16278 677 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 PAMP19021 973 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 PHBP35232 272 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 CLCNKAP51800 687 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 CTSCP53634 463 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 PERM1Q5SV97 790 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 NAGSQ8N159 534 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 AGGF1Q8N302 714 aaeCLIP20.19■□□□□ 0.821e-8■■■□□ 16.5
FOXN3-209ENST00000555353 CCDC74AQ96AQ1 378 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 SGF29Q96ES7 293 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 CFAP36Q96G28 342 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 ZDHHC3Q9NYG2 299 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 TBC1D29Q9UFV1 150 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 SLC23A2Q9UGH3 650 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 RPS6KL1Q9Y6S9 549 aa20.19■□□□□ 0.82
FOXN3-209ENST00000555353 USP1O94782 785 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 GOT2P00505 430 aaKnown RBP20.18■□□□□ 0.82
FOXN3-209ENST00000555353 SLC2A4P14672 509 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 H2AFXP16104 143 aaPredicted RBP20.18■□□□□ 0.82
FOXN3-209ENST00000555353 SPINK2P20155 84 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 MAZP56270 477 aaKnown RBP20.18■□□□□ 0.82
FOXN3-209ENST00000555353 SMAD1Q15797 465 aaKnown RBP20.18■□□□□ 0.82
FOXN3-209ENST00000555353 SPANXN3Q5MJ09 141 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 MICALCLQ6ZW33 695 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 TMEM135Q86UB9 458 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 AMZ2Q86W34 360 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 PIANPQ8IYJ0 282 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 OR4L1Q8NH43 312 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 PATE1Q8WXA2 126 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 ZNF669Q96BR6 464 aaPredicted RBP20.18■□□□□ 0.82
FOXN3-209ENST00000555353 TTC1Q99614 292 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 CCDC3Q9BQI4 270 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 TXLNGYQ9BZA5 131 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 VPS37BQ9H9H4 285 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 NINJ2Q9NZG7 142 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 LRIT1Q9P2V4 623 aa20.18■□□□□ 0.82
FOXN3-209ENST00000555353 DNMT3AQ9Y6K1 912 aaPredicted RBP20.18■□□□□ 0.82
FOXN3-209ENST00000555353 UNC13CQ8NB66 2214 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 NUDT21O43809 227 aaKnown RBP20.17■□□□□ 0.82
FOXN3-209ENST00000555353 OPA1O60313 960 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 KCNJ13O60928 360 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 POP7O75817 140 aaKnown RBP20.17■□□□□ 0.82
FOXN3-209ENST00000555353 PRSS56P0CW18 603 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 ATP1B2P14415 290 aaPredicted RBP20.17■□□□□ 0.82
FOXN3-209ENST00000555353 FOXN2P32314 431 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 SHC2P98077 582 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 B4GALNT1Q00973 533 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 KYNUQ16719 465 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 FASTKD1Q53R41 847 aaKnown RBP20.17■□□□□ 0.82
FOXN3-209ENST00000555353 HES3Q5TGS1 186 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 TMPRSS7Q7RTY8 843 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 C11orf96Q7Z7L8 435 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 TMPRSS12Q86WS5 348 aa20.17■□□□□ 0.82
FOXN3-209ENST00000555353 IGDCC3Q8IVU1 814 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms