RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 MID1IP1Q9NPA3 183 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 ZDHHC4Q9NPG8 344 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 RIMKLBQ9ULI2 386 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 BTRCQ9Y297 605 aa11.56□□□□□ -0.56
SHMT2-212ENST00000554467 C9JVG2 144 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 VPS26AO75436 327 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 HSPA1AP0DMV8 641 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 HSPA1BP0DMV9 641 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 PABPC1P11940 636 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 SERPINA4P29622 427 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 PRDX3P30048 256 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 NUDT2P50583 147 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 CCR3P51677 355 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 SUOXP51687 545 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 HERVK_113P63132 956 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 ARHGAP15Q53QZ3 475 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 LRRC66Q68CR7 880 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 PSRC1Q6PGN9 363 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 ELMSAN1Q6PJG2 1045 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 SP7Q8TDD2 431 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 LMLNQ96KR4 655 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 C3orf30Q96M34 536 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 ERVK-6Q9BXR3 956 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 SPHK2Q9NRA0 654 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 MRPS23Q9Y3D9 190 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 TRAF6Q9Y4K3 522 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 COPG1Q9Y678 874 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 MTCL1Q9Y4B5 1905 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 CAPN8A6NHC0 703 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 TTC34A8MYJ7 566 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 SERPINB7O75635 380 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 TSPAN12O95859 305 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 MYBPC1Q00872 1141 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 ANKDD1AQ495B1 522 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 MPP7Q5T2T1 576 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 PTRHD1Q6GMV3 140 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 CRTC1Q6UUV9 634 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 GPR26Q8NDV2 337 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 FUBP1Q96AE4 644 aaKnown RBP11.55□□□□□ -0.56
SHMT2-212ENST00000554467 ASIC4Q96FT7 647 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 TMEM98Q9Y2Y6 226 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 TIMM22Q9Y584 194 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 AK5Q9Y6K8 562 aa11.55□□□□□ -0.56
SHMT2-212ENST00000554467 ANTXRLA6NF34 631 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 HTRA2O43464 458 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 TRMUO75648 421 aaKnown RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 IDO1P14902 403 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 ITGAXP20702 1163 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 ARL1P40616 181 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 RXRGP48443 463 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 HK3P52790 923 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 PKNOX1P55347 436 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CACNG1Q06432 222 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 UGT3A1Q6NUS8 523 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 GK5Q6ZS86 529 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 DET1Q7L5Y6 550 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 GPR65Q8IYL9 337 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 FBXO39Q8N4B4 442 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 RSPRY1Q96DX4 576 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 HACD3Q9P035 362 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 FAM8A1Q9UBU6 413 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 COMMD10Q9Y6G5 202 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CEPT1Q9Y6K0 416 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 OAS3Q9Y6K5 1087 aaKnown RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 TPD52L2O43399 206 aaKnown RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CDK14O94921 469 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 GUCA1CO95843 209 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 TFPTP0C1Z6 253 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 ENO3P13929 434 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 LHCGRP22888 699 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 SNRPD1P62314 119 aaKnown RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CREB5Q02930 508 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 NFATC2Q13469 925 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 TMEM53Q6P2H8 277 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CYHR1Q6ZMK1 362 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 UBE2Q1Q7Z7E8 422 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 ADIPOR2Q86V24 386 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 SLC22A9Q8IVM8 553 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 ADGRG2Q8IZP9 1017 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 RCN3Q96D15 328 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CMTM5Q96DZ9 223 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CCDC126Q96EE4 140 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 KLHL32Q96NJ5 620 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CDK15Q96Q40 435 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 TCF12Q99081 682 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 SYTL2Q9HCH5 934 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 SUN2Q9UH99 717 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 MBD1Q9UIS9 605 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CRLS1Q9UJA2 301 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 SLC25A13Q9UJS0 675 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 GLYATL1P3A0A0U1RQE8 302 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 HTR3EA5X5Y0 456 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 H3BNX3 289 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 DNAJA2O60884 412 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 FKBP6O75344 327 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 MTX2O75431 263 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 PBX2P40425 430 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 TBCCQ15814 346 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 CDKN3Q16667 212 aa11.54□□□□□ -0.56
SHMT2-212ENST00000554467 SFTPA1Q8IWL2 248 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms