RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 INSCQ1MX18 579 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 ANKRD20A8PQ5CZ79 823 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 ATP1A1-AS1Q5TC04 95 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 IYDQ6PHW0 289 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 CRTC3Q6UUV7 619 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 PEX26Q7Z412 305 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 ARHGAP22Q7Z5H3 698 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RASGRP3Q8IV61 690 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RASGEF1CQ8N431 466 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 ESX1Q8N693 406 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 TEX26Q8N6G2 289 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 KCTD6Q8NC69 237 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 IFT81Q8WYA0 676 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 STAMBPL1Q96FJ0 436 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 ELMO2Q96JJ3 720 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 TGM7Q96PF1 710 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 KRT12Q99456 494 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 NUP85Q9BW27 656 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 SPATA16Q9BXB7 569 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 TBC1D10AQ9BXI6 508 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 THAP2Q9H0W7 228 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 EPB41L1Q9H4G0 881 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 FAM83DQ9H4H8 585 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RMI1Q9H9A7 625 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 PRDM8Q9NQV8 689 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 FBXO8Q9NRD0 319 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 KLC4Q9NSK0 619 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RCOR3Q9P2K3 495 aaPredicted RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 CPNE7Q9UBL6 633 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RSPH14Q9UHP6 348 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 RRP15Q9Y3B9 282 aaKnown RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 PCYT1BQ9Y5K3 369 aaPredicted RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 MRPS18BQ9Y676 258 aaKnown RBP8.72□□□□□ -1.01
TDP1-208ENST00000553989 RPS6KL1Q9Y6S9 549 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
TDP1-208ENST00000553989 PRR19A6NJB7 356 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 OR5K4A6NMS3 321 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 PDZK1P1A8MUH7 402 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 FADS2P1A8MWK0 482 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 MKRN2OSH3BPM6 223 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 MYO1CO00159 1063 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 MYO1FO00160 1098 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 MATN3O15232 486 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 CEP104O60308 925 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 KATNA1O75449 491 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 VIPP01282 170 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 HLA-DQB2P05538 268 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 CD48P09326 243 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 TYRP1P17643 537 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 MX2P20592 715 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 CD86P42081 329 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 STAT5AP42229 794 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 SPINT3P49223 89 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 HADHBP55084 474 aaKnown RBP8.71□□□□□ -1.02
TDP1-208ENST00000553989 GFERP55789 205 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 CORO7P57737 925 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 RPL26P61254 145 aaKnown RBP8.71□□□□□ -1.02
TDP1-208ENST00000553989 SLC7A5Q01650 507 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 ERV3-1Q14264 604 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 NCBP2-AS2Q69YL0 99 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 TIPARPQ7Z3E1 657 aaKnown RBP8.71□□□□□ -1.02
TDP1-208ENST00000553989 NLRP8Q86W28 1048 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 ATCAYQ86WG3 371 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 RHOT2Q8IXI1 618 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 NIPA2Q8N8Q9 360 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 LRRC57Q8N9N7 239 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 CCNYQ8ND76 341 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 RUNDC3BQ96NL0 473 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 MLPHQ9BV36 600 aaPredicted RBP8.71□□□□□ -1.02
TDP1-208ENST00000553989 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 OR2AG1Q9H205 316 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 CARD9Q9H257 536 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 PDP2Q9P2J9 529 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 LNPEPQ9UIQ6 1025 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 NENFQ9UMX5 172 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 RPL26L1Q9UNX3 145 aaKnown RBP8.71□□□□□ -1.02
TDP1-208ENST00000553989 TP53TG5Q9Y2B4 290 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 DNAJC16Q9Y2G8 782 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 TMEM184BQ9Y519 407 aaPredicted RBP8.71□□□□□ -1.02
TDP1-208ENST00000553989 KCTD3Q9Y597 815 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 NAV2Q8IVL1 2488 aa8.71□□□□□ -1.02
TDP1-208ENST00000553989 GOLGA6L10A0A0M3HER8 536 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 CDC14CA4D256 554 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 LILRA5A6NI73 299 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 MIF4GDA9UHW6 222 aaKnown RBP8.7□□□□□ -1.02
TDP1-208ENST00000553989 EIF3HO15372 352 aaKnown RBP eCLIP8.7□□□□□ -1.02
TDP1-208ENST00000553989 NUAK1O60285 661 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 KIAA0754O94854 1291 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 UBXN7O94888 489 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 SLC25A14O95258 325 aaPredicted RBP8.7□□□□□ -1.02
TDP1-208ENST00000553989 DLGAP3O95886 979 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 FTCDO95954 541 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 NTRK1P04629 796 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 ANKRD34CP0C6C1 535 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 MYBL2P10244 700 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 ZNF8P17098 575 aaPredicted RBP8.7□□□□□ -1.02
TDP1-208ENST00000553989 CCNCP24863 283 aa8.7□□□□□ -1.02
TDP1-208ENST00000553989 CARSP49589 748 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms