RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SIX1Q15475 284 aaPredicted RBP17.87■□□□□ 0.45
SHMT2-206ENST00000553529 ABRAXAS1Q6UWZ7 409 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 FAM92BQ6ZTR7 304 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 TRIM48Q8IWZ4 208 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 UNC5BQ8IZJ1 945 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 SYCE1Q8N0S2 351 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 AGBL5Q8NDL9 886 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 ELMO2Q96JJ3 720 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 PPM1MQ96MI6 270 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 TTC25Q96NG3 672 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 SRPK1Q96SB4 655 aaKnown RBP17.87■□□□□ 0.45
SHMT2-206ENST00000553529 WWP1Q9H0M0 922 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 SLC40A1Q9NP59 571 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 SMOXQ9NWM0 555 aa17.87■□□□□ 0.45
SHMT2-206ENST00000553529 AAR2Q9Y312 384 aaKnown RBP17.87■□□□□ 0.45
SHMT2-206ENST00000553529 LILRA5A6NI73 299 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 GPR89AB7ZAQ6 455 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 LIASO43766 372 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 STK10O94804 968 aaKnown RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 UBXN7O94888 489 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 POLBP06746 335 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 GPR89BP0CG08 455 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 ZNF28P17035 718 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 MSH3P20585 1137 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 IDSP22304 550 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 MC4RP32245 332 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 ARCN1P48444 511 aaKnown RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 CCZ1BP86790 482 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 CCZ1P86791 482 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 OASLQ15646 514 aaKnown RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 RPE65Q16518 533 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 LDLRAP1Q5SW96 308 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 FBXO38Q6PIJ6 1188 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 WDR74Q6RFH5 385 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 TIPARPQ7Z3E1 657 aaKnown RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 AMZ2Q86W34 360 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 PIANPQ8IYJ0 282 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 OR52K1Q8NGK4 314 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 BRSK1Q8TDC3 778 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 NKD1Q969G9 470 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 TMEM159Q96B96 161 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 CXorf40BQ96DE9 158 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 CALR3Q96L12 384 aaKnown RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 RMDN2Q96LZ7 410 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 TAAR9Q96RI9 348 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 INSM2Q96T92 566 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 IMP3Q9NV31 184 aaKnown RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 CRLS1Q9UJA2 301 aa17.86■□□□□ 0.45
SHMT2-206ENST00000553529 MN1Q10571 1320 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-206ENST00000553529 C2orf81A6NN90 581 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 PYCARD-AS1I3L0S3 204 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 CAPN5O15484 640 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-206ENST00000553529 EPHA4P54764 986 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 TRA2AQ13595 282 aaKnown RBP eCLIP17.85■□□□□ 0.45
SHMT2-206ENST00000553529 ITGA9Q13797 1035 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 PARP6Q2NL67 630 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 NAPRTQ6XQN6 538 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 SLC13A5Q86YT5 568 aaPredicted RBP17.85■□□□□ 0.45
SHMT2-206ENST00000553529 RTP4Q96DX8 246 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 STN1Q9H668 368 aaKnown RBP17.85■□□□□ 0.45
SHMT2-206ENST00000553529 ETNK1Q9HBU6 452 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 SIDT1Q9NXL6 827 aaKnown RBP17.85■□□□□ 0.45
SHMT2-206ENST00000553529 SLC2A6Q9UGQ3 507 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 PCDHGA4Q9Y5G9 962 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 PRSS21Q9Y6M0 314 aa17.85■□□□□ 0.45
SHMT2-206ENST00000553529 GOLGA6L9A6NEM1 432 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 OR5K4A6NMS3 321 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 IFNB1P01574 187 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 C9P02748 559 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 SLC2A4P14672 509 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 LIFP15018 202 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 AMD1P17707 334 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 CETN2P41208 172 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 DMPKQ09013 629 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 KCNAB1Q14722 419 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 CLPPQ16740 277 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-206ENST00000553529 LINC00303Q3SY05 128 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 TAF1BQ53T94 588 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-206ENST00000553529 MANEAQ5SRI9 462 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 MEI1Q5TIA1 1274 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 AGAP9Q5VTM2 703 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 IRGCQ6NXR0 463 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 NXPE1Q8N323 547 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 ZNF843Q8N446 348 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 CLDN19Q8N6F1 224 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 DTX3LQ8TDB6 740 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 SNRNP27Q8WVK2 155 aaKnown RBP17.84■□□□□ 0.45
SHMT2-206ENST00000553529 EXTL1Q92935 676 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 C9orf72Q96LT7 481 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 ZNF778Q96MU6 729 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 ARNT2Q9HBZ2 717 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 POT1Q9NUX5 634 aa17.84■□□□□ 0.45
SHMT2-206ENST00000553529 AGAP14A8MT82 685 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 TIAF1O95411 115 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 AP2A1O95782 977 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 CXCR5P32302 372 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 CAPZBP47756 277 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 TERF1P54274 439 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 UCNP55089 124 aa17.83■□□□□ 0.44
SHMT2-206ENST00000553529 ZRANB3Q5FWF4 1079 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms