RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TYRP1P17643 537 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 PSMA3P25788 255 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 TSPAN7P41732 249 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 LEPRP48357 1165 aaKnown RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 PPP1CAP62136 330 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 GPR18Q14330 331 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 ANKS6Q68DC2 871 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 TMEM220Q6QAJ8 160 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 SYCE1Q8N0S2 351 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 JPH3Q8WXH2 748 aaPredicted RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 NKD1Q969G9 470 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 SH3KBP1Q96B97 665 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 SGF29Q96ES7 293 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 TAAR9Q96RI9 348 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 DDA1Q9BW61 102 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 POT1Q9NUX5 634 aa12.78□□□□□ -0.36
NPAS3-209ENST00000551008 PIH1D1Q9NWS0 290 aaKnown RBP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
NPAS3-209ENST00000551008 IGLV3-16A0A075B6K0 115 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 TRBV5-4A0A0C4DH59 114 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 TK2O00142 265 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 ZW10O43264 779 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 ANKRD34CP0C6C1 535 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 TPH1P17752 444 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 PBLDP30039 288 aaPredicted RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 CSTF2P33240 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 TMPRSS15P98073 1019 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 MC2RQ01718 297 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 RHDQ02161 417 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 ITGA9Q13797 1035 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 RPE65Q16518 533 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 PARP6Q2NL67 630 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 BCL7AQ4VC05 210 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 FNBP1LQ5T0N5 605 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 DUS1LQ6P1R4 473 aaKnown RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 CCDC81Q6ZN84 652 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 PRUNE1Q86TP1 453 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 AMZ2Q86W34 360 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 FAM129CQ86XR2 697 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 TAB3Q8N5C8 712 aaPredicted RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 GLIS1Q8NBF1 620 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 LSM14AQ8ND56 463 aaKnown RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 AHCYL2Q96HN2 611 aaKnown RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 C9orf72Q96LT7 481 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 CTRCQ99895 268 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 EPB41L1Q9H4G0 881 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 STN1Q9H668 368 aaKnown RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 ASB8Q9H765 288 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 SLC39A1Q9NY26 324 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.37
NPAS3-209ENST00000551008 KLHL3Q9UH77 587 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 PSMD13Q9UNM6 376 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 PCDHGA4Q9Y5G9 962 aa12.77□□□□□ -0.37
NPAS3-209ENST00000551008 FER1L5A0AVI2 2057 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 C2orf81A6NN90 581 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 LIASO43766 372 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 KIF1CO43896 1103 aaKnown RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 UBXN7O94888 489 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 AP2A1O95782 977 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 VIPP01282 170 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 IDSP22304 550 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 CD82P27701 267 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 CETN2P41208 172 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 TNNT3P45378 269 aaPredicted RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 CAPZBP47756 277 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 GTF2H3Q13889 308 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 LY6DQ14210 128 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 PRPSAP1Q14558 356 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 LINC00303Q3SY05 128 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 METRNLQ641Q3 311 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 ARHGEF18Q6ZSZ5 1173 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 TIPARPQ7Z3E1 657 aaKnown RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 SLC13A5Q86YT5 568 aaPredicted RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 PIANPQ8IYJ0 282 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 NXPE1Q8N323 547 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 RNF10Q8N5U6 811 aaKnown RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 AVL9Q8NBF6 648 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 RNF31Q96EP0 1072 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 LINC00615Q96LM1 132 aaPredicted RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 RMDN2Q96LZ7 410 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 C19orf43Q9BQ61 176 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 ZCCHC2Q9C0B9 1178 aaKnown RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 PILRAQ9UKJ1 303 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 GUCA1BQ9UMX6 200 aa12.76□□□□□ -0.37
NPAS3-209ENST00000551008 CFAP20Q9Y6A4 193 aaKnown RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 DNMT3AQ9Y6K1 912 aaPredicted RBP12.76□□□□□ -0.37
NPAS3-209ENST00000551008 STMND1H3BQB6 276 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms