RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, human

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-206	ENST00000550406	RIF1	Q5UIP0	2472 aa	Known RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	CFAP99	D6REC4	459 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	LMO7DN	F2Z398	122 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	TRIM38	O00635	465 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	PRMT5	O14744	637 aa	Predicted RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	YKT6	O15498	198 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	FOXD2	O60548	495 aa	Predicted RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	EML2	O95834	649 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	RALB	P11234	206 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	FMO4	P31512	558 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	PLA2G5	P39877	138 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	ABCG1	P45844	678 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	CLCNKA	P51800	687 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	LIMK1	P53667	647 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	ARHGAP8	P85298	464 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	SLMAP	Q14BN4	828 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	UAP1L1	Q3KQV9	507 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	CEP128	Q6ZU80	1094 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	GALNT7	Q86SF2	657 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	ALYREF	Q86V81	257 aa	Known RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	FSTL5	Q8N475	847 aa	Predicted RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	ZNF514	Q96K75	400 aa	Predicted RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	TTC1	Q99614	292 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	TIMM29	Q9BSF4	260 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	VPS37B	Q9H9H4	285 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	PPAN	Q9NQ55	473 aa	Known RBP	12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	KLC4	Q9NSK0	619 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	GALP	Q9UBC7	116 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	MED16	Q9Y2X0	877 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	ZNF292	O60281	2723 aa		12.83	□□□□□ -0.36
RAB5C-206	ENST00000550406	WDR87	Q6ZQQ6	2873 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	UBA6	A0AVT1	1052 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	FFAR2	O15552	330 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	ACSL3	O95573	720 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	ITGB6	P18564	788 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	PBLD	P30039	288 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	PPARG	P37231	505 aa	Predicted RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	PMS2	P54278	862 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	ADAR	P55265	1226 aa	Known RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	EIF3B	P55884	814 aa	Known RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	DMPK	Q09013	629 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	NFE2L1	Q14494	772 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	ELOC	Q15369	112 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	DEFB133	Q30KQ1	61 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	KBTBD12	Q3ZCT8	623 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	RBM20	Q5T481	1227 aa	Known RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	ZNF449	Q6P9G9	518 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	SLC30A9	Q6PML9	568 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	NAPRT	Q6XQN6	538 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	KIAA0408	Q6ZU52	694 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	TAF8	Q7Z7C8	310 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	AMZ2	Q86W34	360 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	KRT222	Q8N1A0	295 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	OR2L2	Q8NH16	312 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	AEN	Q8WTP8	325 aa	Known RBP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	FAM122A	Q96E09	287 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	CCM2	Q9BSQ5	444 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	GSDMC	Q9BYG8	508 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	TAAR2	Q9P1P5	351 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	TBC1D29	Q9UFV1	150 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	DNAJC16	Q9Y2G8	782 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	PCNX2	A6NKB5	2137 aa		12.82	□□□□□ -0.36
RAB5C-206	ENST00000550406	LY6G6E	A0A0G2JKS1	128 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	C17orf113	A0A1B0GUU1	675 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406		A6NCN8	305 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	MGAT4D	A6NG13	374 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	TPP1	O14773	563 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	TM4SF5	O14894	197 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	RIPK2	O43353	540 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	SH3BP5	O60239	455 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	CBFA2T3	O75081	653 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	NIPSNAP2	O75323	286 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	SPAG6	O75602	509 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	FAM155B	O75949	473 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	OR56A5	P0C7T3	313 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	MYF5	P13349	255 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	PKM	P14618	531 aa	Known RBP	12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	CCR7	P32248	378 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	ACTR1B	P42025	376 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	ACTR1A	P61163	376 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	ILF3	Q12906	894 aa	Known RBP eCLIP	12.81	□□□□□ -0.36	2e-6	■□□□□ 11.1
RAB5C-206	ENST00000550406	SLC14A1	Q13336	389 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	LRP8	Q14114	963 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	UAP1	Q16222	522 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	INSC	Q1MX18	579 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	RNF187	Q5TA31	235 aa	Predicted RBP	12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	METRNL	Q641Q3	311 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	OGFOD3	Q6PK18	319 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	LVRN	Q6Q4G3	990 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	STRA8	Q7Z7C7	330 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	PIP4P1	Q86T03	277 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	LRRC6	Q86X45	466 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	GKN2	Q86XP6	184 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	SDR16C5	Q8N3Y7	309 aa		12.81	□□□□□ -0.36
RAB5C-206	ENST00000550406	EID2	Q8N6I1	236 aa		12.81	□□□□□ -0.36

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