RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 RPS18P62269 152 aaKnown RBP12.29□□□□□ -0.44
COPS7A-221ENST00000546229 TUBB3Q13509 450 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 SEMA5AQ13591 1074 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 SEPT6Q14141 434 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 PDK1Q15118 436 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 UGT8Q16880 541 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 LRRC38Q5VT99 294 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 MFSD7Q6UXD7 560 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 PPP1R3BQ86XI6 285 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 SLC38A9Q8NBW4 561 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 CTNNBL1Q8WYA6 563 aaPredicted RBP12.29□□□□□ -0.44
COPS7A-221ENST00000546229 UBXN4Q92575 508 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 ZDHHC12Q96GR4 267 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 ZNF830Q96NB3 372 aaPredicted RBP12.29□□□□□ -0.44
COPS7A-221ENST00000546229 FCRL4Q96PJ5 515 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 GPR63Q9BZJ6 419 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 BPIFA1Q9NP55 256 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 UBP1Q9NZI7 540 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 LNPEPQ9UIQ6 1025 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 KCND3Q9UK17 655 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 CRYBG3Q68DQ2 2970 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 NOTCH2Q04721 2471 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 CSMD1Q96PZ7 3565 aa12.29□□□□□ -0.44
COPS7A-221ENST00000546229 CELSR2Q9HCU4 2923 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 A0A0A6YYK5 440 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 SSU72P8A0A1W2PR75 194 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 CDC14CA4D256 554 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 OR5K3A6NET4 321 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 PPP1R12AO14974 1030 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 PMPCBO75439 489 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 KRT1P04264 644 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 AMD1P17707 334 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 NFKB1P19838 968 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 ANP32AP39687 249 aaKnown RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 WNT3AP56704 352 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 NFE2L1Q14494 772 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 MESDQ14696 234 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 CHRNA6Q15825 494 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 ZNF658BQ4V348 819 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 ZNF789Q5FWF6 425 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 SIRPB2Q5JXA9 342 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 GPRC6AQ5T6X5 926 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 CAPRIN2Q6IMN6 1127 aaKnown RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 IRGCQ6NXR0 463 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 DUS1LQ6P1R4 473 aaKnown RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 ASB18Q6ZVZ8 466 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 RASGRP3Q8IV61 690 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 D2HGDHQ8N465 521 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 SLC35G2Q8TBE7 412 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 ZNF501Q96CX3 271 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 CXorf40BQ96DE9 158 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 ZNF514Q96K75 400 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 PPM1MQ96MI6 270 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 MAP3K3Q99759 626 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 IFNKQ9P0W0 207 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 SAE1Q9UBE0 346 aaPredicted RBP12.28□□□□□ -0.44
COPS7A-221ENST00000546229 TRIM10Q9UDY6 481 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 PADI1Q9ULC6 663 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 MYO9AB2RTY4 2548 aa12.28□□□□□ -0.44
COPS7A-221ENST00000546229 LRBAP50851 2863 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 SYCE3A1L190 88 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 BLACEA4D250 179 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 TLCD2A6NGC4 264 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A9O60656 530 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 KCNJ13O60928 360 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 CEACAM4O75871 244 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 EPOP01588 193 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 CAPN1P07384 714 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 MTHFD1P11586 935 aaKnown RBP12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A6P19224 532 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A1P22309 533 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A4P22310 534 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 SPAM1P38567 509 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 GPS2Q13227 327 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 MSLNQ13421 630 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-221ENST00000546229 METRNLQ641Q3 311 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 LCN10Q6JVE6 187 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 FAM199XQ6PEV8 388 aaPredicted RBP12.27□□□□□ -0.45
COPS7A-221ENST00000546229 KMT5CQ86Y97 462 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 NAT14Q8WUY8 206 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 CD180Q99467 661 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 TWSG1Q9GZX9 223 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 TRABDQ9H4I3 376 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A7Q9HAW7 530 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A10Q9HAW8 530 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 UGT1A8Q9HAW9 530 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 FGF21Q9NSA1 209 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 FAM153AQ9UHL3 310 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 BTRCQ9Y297 605 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 HYOU1Q9Y4L1 999 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 PCDHB3Q9Y5E6 796 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 PCDHGA9Q9Y5G4 932 aaKnown RBP12.27□□□□□ -0.45
COPS7A-221ENST00000546229 CENPEQ02224 2701 aa12.27□□□□□ -0.45
COPS7A-221ENST00000546229 SPTBP11277 2137 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms