RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FNBP1LQ5T0N5 605 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 TSTD2Q5T7W7 516 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 METRNLQ641Q3 311 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 TTC27Q6P3X3 843 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ZNF574Q6ZN55 896 aaPredicted RBP11.66□□□□□ -0.54
YBX3-217ENST00000546164 PIM3Q86V86 326 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 SERPINA9Q86WD7 417 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 RBM12BQ8IXT5 1001 aaKnown RBP11.66□□□□□ -0.54
YBX3-217ENST00000546164 OR4D9Q8NGE8 314 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 OR13J1Q8NGT2 312 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 OR2L2Q8NH16 312 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 FGF11Q92914 225 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 MAGOHBQ96A72 148 aaKnown RBP11.66□□□□□ -0.54
YBX3-217ENST00000546164 SGF29Q96ES7 293 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 DCUN1D1Q96GG9 259 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 SGSM3Q96HU1 749 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 SLC38A3Q99624 504 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 NUDT22Q9BRQ3 303 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 FOXP3Q9BZS1 431 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 RDH14Q9HBH5 336 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ASCL3Q9NQ33 180 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 POT1Q9NUX5 634 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ZNF624Q9P2J8 865 aaPredicted RBP11.66□□□□□ -0.54
YBX3-217ENST00000546164 PDP2Q9P2J9 529 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 RAXQ9Y2V3 346 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 NEU2Q9Y3R4 380 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 TCAF1Q9Y4C2 921 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ITPR1Q14643 2758 aa11.66□□□□□ -0.54
YBX3-217ENST00000546164 ZFHX4Q86UP3 3567 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 A0A087WV48 116 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 PLD2O14939 933 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 HGSO14964 777 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 TLX3O43711 291 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 DUX1O43812 170 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 PHF2O75151 1096 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 VIPP01282 170 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 ITGA2BP08514 1039 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 ATP1B2P14415 290 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 FOXN2P32314 431 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 CSF2RBP32927 897 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 FNTAP49354 379 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 CDKN1CP49918 316 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 LIMK2P53671 638 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 BASP1P80723 227 aaKnown RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 CFHR1Q03591 330 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 TRA2AQ13595 282 aaKnown RBP eCLIP11.65□□□□□ -0.54
YBX3-217ENST00000546164 ITIH4Q14624 930 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 CCDC38Q502W7 563 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 ZRANB3Q5FWF4 1079 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 PCID2Q5JVF3 399 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 ARMC3Q5W041 872 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 WDR74Q6RFH5 385 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 XKR5Q6UX68 686 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 FAM83HQ6ZRV2 1179 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 USP53Q70EK8 1073 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 RAB11FIP2Q7L804 512 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 PIANPQ8IYJ0 282 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 BEND7Q8N7W2 519 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 OR10G6Q8NH81 332 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
YBX3-217ENST00000546164 SLC46A1Q96NT5 459 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 AP1M1Q9BXS5 423 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 IL22Q9GZX6 179 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 SEMA6CQ9H3T2 930 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 FAM96AQ9H5X1 160 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 EPB41L5Q9HCM4 733 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 THSD1Q9NS62 852 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 ACSL5Q9ULC5 683 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 WDR37Q9Y2I8 494 aa11.65□□□□□ -0.54
YBX3-217ENST00000546164 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 IGHV5-10-1A0A0J9YXX1 117 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 GOLGA6L10A0A0M3HER8 536 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 C17orf113A0A1B0GUU1 675 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 CCDC162PA2VCL2 907 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 CDRT15L2A8MXV6 281 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 AP2A2O94973 939 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 KRT14P02533 472 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 GSTM1P09488 218 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 THRAP10827 490 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 RBMS1P29558 406 aaKnown RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 EIF2S3P41091 472 aaKnown RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 HALP42357 657 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 NSG1P42857 185 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 NPY2RP49146 381 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 DRG2P55039 364 aaKnown RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 GNG11P61952 73 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 GSTM4Q03013 218 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 NFE2L1Q14494 772 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 KCNJ11Q14654 390 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 CLCA4Q14CN2 919 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 SEPT7Q16181 437 aaKnown RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 DBN1Q16643 649 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 KIF26BQ2KJY2 2108 aa11.64□□□□□ -0.55
YBX3-217ENST00000546164 ZNF658BQ4V348 819 aaPredicted RBP11.64□□□□□ -0.55
YBX3-217ENST00000546164 NKAIN2Q5VXU1 208 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms