RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 ITM2AO43736 263 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TCEA3O75764 348 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 STBD1O95210 358 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 OR6A2O95222 327 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SLC35G4P0C7Q5 338 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SLC26A3P40879 764 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CCL14Q16627 93 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SLCO6A1Q86UG4 719 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SLCO2A1Q92959 643 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CXorf40BQ96DE9 158 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 FERD3LQ96RJ6 166 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 DNAJC11Q9NVH1 559 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CD84Q9UIB8 345 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 DGKBQ9Y6T7 804 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 DUOX1Q9NRD9 1551 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 ACSL4O60488 711 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SDHBP21912 280 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 MANFP55145 182 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 OGDHQ02218 1023 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TMEM63BQ5T3F8 832 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TMEM198Q66K66 360 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CPNE9Q8IYJ1 553 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 B3GALT6Q96L58 329 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SMPD3Q9NY59 655 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 RBPJLQ9UBG7 517 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 FKBPLQ9UIM3 349 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 ELOVL7A1L3X0 281 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TMCC2O75069 709 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 HLA-DQA2P01906 255 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 NR4A1P22736 598 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 NUP62P37198 522 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 JAG1P78504 1218 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SRSF11Q05519 484 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TAB1Q15750 504 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 ARMC3Q5W041 872 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CMASQ8NFW8 434 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 VANGL1Q8TAA9 524 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 EXO5Q9H790 373 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 IFNA16P05015 189 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 PBX3P40426 434 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 RPS9P46781 194 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SMIM11AP58511 58 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 BHLHB9Q6PI77 547 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TDHQ8IZJ6 230 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 PHOSPHO2Q8TCD6 241 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 FAM124BQ9H5Z6 455 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 ZNF395Q9H8N7 513 aaPredicted RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CCNB1IP1Q9NPC3 277 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 DUS2Q9NX74 493 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 FCF1Q9Y324 198 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 PARP4Q9UKK3 1724 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TAF4O00268 1085 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SYN3O14994 580 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SERPINB7O75635 380 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 CAPN1P07384 714 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 UROSP10746 265 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 PRG2P13727 222 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 IGFBP5P24593 272 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SPAM1P38567 509 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 GTF2H2Q13888 395 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 PYDC2Q56P42 97 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 LDLRAP1Q5SW96 308 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 GTF2H2CQ6P1K8 395 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 DLK2Q6UY11 383 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 THAP5Q7Z6K1 395 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 ANKRD46Q86W74 232 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 SETD7Q8WTS6 366 aaKnown RBP14.39□□□□□ -0.11
CACNB1-206ENST00000539338 TMEM175Q9BSA9 504 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 MINDY3Q9H8M7 445 aa14.39□□□□□ -0.11
CACNB1-206ENST00000539338 DYTNA2CJ06 578 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CACNB4O00305 520 aaPredicted RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 FPGTO14772 594 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 INSIG1O15503 277 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CLDN9O95484 217 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 PPIBP23284 216 aaKnown RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 HTR7P34969 479 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CTSKP43235 329 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 BIKQ13323 160 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 HNRNPDQ14103 355 aaKnown RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 MZT2AQ6P582 158 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 ATG14Q6ZNE5 492 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 PIH1D2Q8WWB5 315 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 OMA1Q96E52 524 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 PRRX2Q99811 253 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 MCMBPQ9BTE3 642 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 NUDT4Q9NZJ9 180 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 MAGP20916 626 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 NCBP2-AS2Q69YL0 99 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CAMKK1Q8N5S9 505 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 ZNF483Q8TF39 744 aaPredicted RBP14.38□□□□□ -0.11
CACNB1-206ENST00000539338 NAT14Q8WUY8 206 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 OR2AG2A6NM03 316 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 TIMP1P01033 207 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 C8AP07357 584 aa14.38□□□□□ -0.11
CACNB1-206ENST00000539338 CCNYL3P0C7X3 344 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms