RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZNF696Q9H7X3 374 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 ACTR3BQ9P1U1 418 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 CLEC4EQ9ULY5 219 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 TMCO1Q9UM00 188 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 RNF11Q9Y3C5 154 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 INSL5Q9Y5Q6 135 aa24.57■■□□□ 1.52
RAB40C-204ENST00000538492 ZFC3H1O60293 1989 aaKnown RBP24.57■■□□□ 1.52
RAB40C-204ENST00000538492 TRIM16O95361 564 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 GNRH1P01148 92 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 RPL5P46777 297 aaKnown RBP24.56■■□□□ 1.52
RAB40C-204ENST00000538492 PPP3CCP48454 512 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 EPHB3P54753 998 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 AP1S1P61966 158 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 SEMG2Q02383 582 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 BNIP2Q12982 314 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 PROKR1Q8TCW9 393 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 NUDT8Q8WV74 236 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 TNKS2Q9H2K2 1166 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 PIF1Q9H611 641 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 PFDN4Q9NQP4 134 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 DNMT3BQ9UBC3 853 aaKnown RBP24.56■■□□□ 1.52
RAB40C-204ENST00000538492 SUN2Q9UH99 717 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 PCDHB1Q9Y5F3 818 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 AQP12BA6NM10 295 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 EEDO75530 441 aaKnown RBP24.56■■□□□ 1.52
RAB40C-204ENST00000538492 NCK1P16333 377 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 ZNF7P17097 686 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-204ENST00000538492 GSK3BP49841 420 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 INPP5AQ14642 412 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 LCN8Q6JVE9 175 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 ADAMTSL2Q86TH1 951 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 AQP12AQ8IXF9 295 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 KIAA2013Q8IYS2 634 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 SFRP1Q8N474 314 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 TMEM199Q8N511 208 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 OR4F6Q8NGB9 312 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 TMEM79Q9BSE2 394 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 OSBPL11Q9BXB4 747 aa24.56■■□□□ 1.52
RAB40C-204ENST00000538492 INTS7Q9NVH2 962 aaKnown RBP24.56■■□□□ 1.52
RAB40C-204ENST00000538492 GOLGA8CPA6NN73 597 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 H0YJX3 145 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 OR7A17O14581 309 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 FFAR2O15552 330 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 PSMA4P25789 261 aaKnown RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 CYP4F8P98187 520 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 ROR2Q01974 943 aaKnown RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 BCL2L1Q07817 233 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 FOXM1Q08050 763 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 GTF2H2Q13888 395 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 GTF2H2CQ6P1K8 395 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 CERS6Q6ZMG9 384 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 TSPEARQ8WU66 669 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 C2orf49Q9BVC5 232 aaPredicted RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 APOL5Q9BWW9 433 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 CFHR5Q9BXR6 569 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 IL26Q9NPH9 171 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 ZMYM5Q9UJ78 669 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 USP22Q9UPT9 525 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 BMP2P12643 396 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 HSPA7P48741 367 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 LIPEQ05469 1076 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 GRIK2Q13002 908 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 NFATC2Q13469 925 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 NADK2Q4G0N4 442 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 PDCD4Q53EL6 469 aaKnown RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 Q6ZNB5 142 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 TPGS1Q6ZTW0 290 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 ANKFN1Q8N957 763 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 PDLIM5Q96HC4 596 aaKnown RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 KCTD14Q9BQ13 255 aaPredicted RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 SEZ6LQ9BYH1 1024 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 MRPS26Q9BYN8 205 aaKnown RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 LEF1Q9UJU2 399 aaPredicted RBP24.55■■□□□ 1.52
RAB40C-204ENST00000538492 PIKFYVEQ9Y2I7 2098 aa24.55■■□□□ 1.52
RAB40C-204ENST00000538492 SMIM31A0A1B0GVY4 71 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 INPP4BO15327 924 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 SLC25A14O95258 325 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 TRBC1P01850 177 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 S100BP04271 92 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 HNF1BP35680 557 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 RAB33AQ14088 237 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 RETSATQ6NUM9 610 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 SLC2A7Q6PXP3 512 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 IPPKQ9H8X2 491 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 PDLIM1O00151 329 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 HTRA2O43464 458 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 IL10P22301 178 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 PCBP2Q15366 365 aaKnown RBP eCLIP24.54■■□□□ 1.528e-6■■□□□ 13.7
RAB40C-204ENST00000538492 AAK1Q2M2I8 961 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 CWF19L1Q69YN2 538 aaKnown RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 ZNF296Q8WUU4 475 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 NMD3Q96D46 503 aaKnown RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 IL21Q9HBE4 155 aa24.54■■□□□ 1.52
RAB40C-204ENST00000538492 GPBP1L1Q9HC44 474 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-204ENST00000538492 ARHGAP10A1A4S6 786 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 GFRA2O00451 464 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 LATS1O95835 1130 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 URODP06132 367 aa24.53■■□□□ 1.52
RAB40C-204ENST00000538492 GDF5P43026 501 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms