RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 KERAO60938 352 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 SUPT7LO94864 414 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 CLDN7O95471 211 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 IGSF6O95976 241 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 CYBBP04839 570 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 PTGER3P43115 390 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 MAPK8P45983 427 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 CDH13P55290 713 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TSNQ15631 228 aaKnown RBP10.62□□□□□ -0.71
CLIP1-210ENST00000538120 ZNF423Q2M1K9 1284 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 EML3Q32P44 896 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 UGT3A2Q3SY77 523 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TAS2R42Q7RTR8 314 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TRIM74Q86UV6 250 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TRIM73Q86UV7 250 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 PELI3Q8N2H9 469 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 VPS37AQ8NEZ2 397 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 RCN3Q96D15 328 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 LRGUKQ96M69 825 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 ZSWIM3Q96MP5 696 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 CATSPER2Q96P56 530 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 PKP2Q99959 881 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TRMOQ9BU70 441 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 RBM38Q9H0Z9 239 aaKnown RBP10.62□□□□□ -0.71
CLIP1-210ENST00000538120 CCDC68Q9H2F9 335 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 EPB41L1Q9H4G0 881 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 MEAF6Q9HAF1 191 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 ZFYVE1Q9HBF4 777 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TDP1Q9NUW8 608 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 GALNT8Q9NY28 637 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 C6orf203Q9P0P8 240 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-210ENST00000538120 HS3ST2Q9Y278 367 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TRAF6Q9Y4K3 522 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 DOCK6Q96HP0 2047 aa10.62□□□□□ -0.71
CLIP1-210ENST00000538120 TRPC5OSA6NMA1 111 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 IQCF5A8MTL0 148 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 CLASP2O75122 1294 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ECI2O75521 394 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ENO3P13929 434 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 DDX6P26196 483 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ATP6V0D1P61421 351 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 RAD51Q06609 339 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 MAP7Q14244 749 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ADGRE1Q14246 886 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PFKFB4Q16877 469 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PRSS36Q5K4E3 855 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 C10orf62Q5T681 223 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PSRC1Q6PGN9 363 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 CHSY3Q70JA7 882 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 BHLHE22Q8NFJ8 381 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 STAG3L4Q8TBR4 150 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 EEF1AKMT1Q8WVE0 214 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 FUBP1Q96AE4 644 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 THAP11Q96EK4 314 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 FAR2Q96K12 515 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 KLHL32Q96NJ5 620 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 NSUN5Q96P11 429 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ATP13A3Q9H7F0 1226 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 IL26Q9NPH9 171 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 FIS1Q9Y3D6 152 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 COPG1Q9Y678 874 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 NPEPPSL1A6NEC2 478 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 VPS26AO75436 327 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 CDK14O94921 469 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 FGF19O95750 216 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 BPIP17213 487 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PPARGP37231 505 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 GNALP38405 381 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 CLCN7P51798 805 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 HK3P52790 923 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 SH3BP2P78314 561 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ZNF77Q15935 545 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PIGGQ5H8A4 983 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 AARS2Q5JTZ9 985 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 CLEC6AQ6EIG7 209 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 C22orf39Q6P5X5 142 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 FAM151BQ6UXP7 276 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 RTL10Q7L3V2 364 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 TSPAN33Q86UF1 283 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 TICAM1Q8IUC6 712 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 NKAPQ8N5F7 415 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 KYQ8NBH2 561 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 KCNJ9Q92806 393 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 IRF7Q92985 503 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
CLIP1-210ENST00000538120 ECHDC3Q96DC8 303 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 PTTG2Q9NZH5 202 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 SLCO3A1Q9UIG8 710 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 SLC30A1Q9Y6M5 507 aa10.61□□□□□ -0.71
CLIP1-210ENST00000538120 C1orf232A0A0U1RR37 186 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 RGSL1A5PLK6 1076 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 A8MX80 341 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 NEDD8-MDP1E9PL57 170 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 H3BSA7 217 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 SLC22A2O15244 555 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 KLK8O60259 260 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 ESR1P03372 595 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 MYOGP15173 224 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms