RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 OGDHLQ9ULD0 1010 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 ADAMTS5Q9UNA0 930 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 MRPS7Q9Y2R9 242 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CASP8AP2Q9UKL3 1982 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 EDIL3O43854 480 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CNMDO75829 334 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 RBP1P09455 135 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CYP2A6P11509 494 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 COL6A1P12109 1028 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 TCF4P15884 667 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 ARRB2P32121 409 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 PIGFQ07326 219 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 ZNF667Q5HYK9 610 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CACHD1Q5VU97 1274 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 LIPMQ5VYY2 423 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 LCN8Q6JVE9 175 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 NAT16Q8N8M0 369 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 MCOLN3Q8TDD5 553 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CBWD1Q9BRT8 395 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 NIPAL2Q9H841 368 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 NMRAL1Q9HBL8 299 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 ZFP14Q9HCL3 533 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 CHRAC1Q9NRG0 131 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 PDE4DIPQ5VU43 2346 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 SBF1O95248 1867 aa10.77□□□□□ -0.69
CLSTN3-207ENST00000537408 LRRC37AA6NMS7 1700 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 BBIP1A8MTZ0 92 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PRSS44E7EML9 344 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 TFECO14948 347 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PDE9AO76083 593 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 KELP23276 732 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 DNAJB1P25685 340 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 GRIA4P48058 902 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 RPL7AP62424 266 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 SMTNL2Q2TAL5 461 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PIK3R6Q5UE93 754 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 OR8K3Q8NH51 312 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 CDC26Q8NHZ8 85 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 BADQ92934 168 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 BCAS3Q9H6U6 928 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 IGSF5Q9NSI5 407 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 EGFL7Q9UHF1 273 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 HMX2A2RU54 273 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 C1QAP02745 245 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 CHRNGP07510 517 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 ITGB5P18084 799 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 CD9P21926 228 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 KDELR1P24390 212 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 UGT2B10P36537 528 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 RARRES1P49788 294 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 MVKQ03426 396 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 TSC22D1Q15714 1073 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 MEP1AQ16819 746 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PAN2Q504Q3 1202 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PPM1JQ5JR12 505 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 LETMD1Q6P1Q0 360 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PLPPR4Q7Z2D5 763 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 FAM149B1Q96BN6 582 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PRMT7Q9NVM4 692 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 OSGIN1Q9UJX0 560 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PCDHB3Q9Y5E6 796 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 UBIAD1Q9Y5Z9 338 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 BAZ2AQ9UIF9 1905 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 ABHD14A-ACY1A0A1B0GW23 586 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 TMEM150BA6NC51 233 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PEX14O75381 377 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 ACRP10323 421 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 ICAM3P32942 547 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 CTNNB1P35222 781 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 MRPS6P82932 125 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 RIPPLY1Q0D2K3 151 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 ARL13AQ5H913 290 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PMF1Q6P1K2 205 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 NOTUMQ6P988 496 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 TMEM270Q6UE05 265 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PRSS42Q7Z5A4 293 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 OR8H3Q8N146 312 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 EMC1Q8N766 993 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 TOX2Q96NM4 488 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 PRRG3Q9BZD7 231 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 IL22Q9GZX6 179 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 IL1RL2Q9HB29 575 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 TMPRSS11EQ9UL52 423 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 DIMT1Q9UNQ2 313 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 HSPB11Q9Y547 144 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 SESN1Q9Y6P5 492 aa10.76□□□□□ -0.69
CLSTN3-207ENST00000537408 A8MUA0 341 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CD1EP15812 388 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 ARSFP54793 590 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 POLR2GP62487 172 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 DAB2P98082 770 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 CBX2Q14781 532 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 TAB1Q15750 504 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 KYAT1Q16773 422 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 BCL7AQ4VC05 210 aa10.75□□□□□ -0.69
CLSTN3-207ENST00000537408 HABP4Q5JVS0 413 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms