RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.51□□□□□ -0.41
SPG11-203ENST00000535302 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 J3QRK9 145 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 MID1O15344 667 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 SLC31A1O15431 190 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 CILPO75339 1184 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 MAPK8P45983 427 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 CPTPQ5TA50 214 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 CHST15Q7LFX5 561 aaPredicted RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 CPA6Q8N4T0 437 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 SPERTQ8NA61 448 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 BTN2A3PQ96KV6 586 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 NECTIN3Q9NQS3 549 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 TBC1D30Q9Y2I9 924 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 DHRS12A0PJE2 317 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 LRRC10BA6NIK2 292 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 TOR1BO14657 336 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 BPNT1O95861 308 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 GPR135Q8IZ08 494 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 SNX33Q8WV41 574 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 ACSS3Q9H6R3 686 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 CKLFQ9UBR5 152 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 KCNU1A8MYU2 1149 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 H3BM21 787 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 CDK14O94921 469 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 FSBPO95073 299 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 NADKO95544 446 aaPredicted RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 SERPINA6P08185 405 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 NOGQ13253 232 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 CCL14Q16627 93 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 TXNDC11Q6PKC3 985 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 C4orf32Q8N8J7 132 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 EIF1ADQ8N9N8 165 aaKnown RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 RP9Q8TA86 221 aaKnown RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 SPATA5L1Q9BVQ7 753 aa12.51□□□□□ -0.41
SPG11-203ENST00000535302 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
SPG11-203ENST00000535302 OR6C75A6NL08 312 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 BHMG1C9JSJ3 638 aaPredicted RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 FSCN2O14926 492 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 METTL18O95568 372 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 FGBP02675 491 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 CCNOP22674 350 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 UQCRC1P31930 480 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 ADRA1BP35368 520 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 NR0B1P51843 470 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 AP1S2P56377 157 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 SLC22A15Q8IZD6 547 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 ASB12Q8WXK4 309 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 AP2M1Q96CW1 435 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 MFSD3Q96ES6 412 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 CST11Q9H112 138 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 BCAS3Q9H6U6 928 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 RNPEPL1Q9HAU8 725 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 DNAJC11Q9NVH1 559 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 SLC17A6Q9P2U8 582 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 DGKEP52429 567 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 PRR23BQ6ZRT6 265 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 AMER2Q8N7J2 671 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 DEC1Q9P2X7 70 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 TRIM64BA6NI03 449 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 PLSCR1O15162 318 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 SLC51AQ86UW1 340 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 PTCD3Q96EY7 689 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 RIPOR3Q96MK2 946 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 B3GNT4Q9C0J1 378 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 EIF1AYO14602 144 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 PRAMEF1O95521 474 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 PGAM2P15259 253 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 GRM3Q14832 879 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 TIMM50Q3ZCQ8 353 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 ZNF557Q8N988 423 aaPredicted RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 LRMDAQ9H2I8 198 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 ARL5AQ9Y689 179 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 GOT2P00505 430 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 COL6A1P12109 1028 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 GMFBP60983 142 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 TEX44Q53QW1 395 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 ADAMTS15Q8TE58 950 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 DLG3Q92796 817 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 TRNAU1APQ9NX07 287 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 OR1F1O43749 312 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 HOXB8P17481 243 aaPredicted RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 SYN1P17600 705 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 PUM1Q14671 1186 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPG11-203ENST00000535302 SLC1A5Q15758 541 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 HKDC1Q2TB90 917 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms